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qh_1_scaffold_13851_1

Organism: QH_1_Viridiplantae_55_6

partial RP 22 / 55 MC: 6 BSCG 14 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: 3..1394

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: transcription initiation factor TFIID subunit 5-like n=1 Tax=Fragaria vesca subsp. vesca RepID=UPI0002C374F1 similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 505.0
  • Bit_score: 314
  • Evalue 2.40e-82
BnaC09g04130D protein {ECO:0000313|EMBL:CDX87098.1}; TaxID=3708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 452.0
  • Bit_score: 313
  • Evalue 5.80e-82
WD-40 repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 247.0
  • Bit_score: 161
  • Evalue 7.40e-37

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Taxonomy

Brassica napus → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1392
CACCTCCAGCACTCCGACAACACCATCGCCCTCTCCATCCTGAACGACAACCTCAGCGTCCACCCCCGAGACGGCGAGCCCGACTCCCTCGAAGAGCAGCCCGAAGACCCTCGGGACCCCTCCGCCCGCCTCGGCGTCCCTGTCCACCCTCTGCCCCAATCGCAGCGCTGGGGCGAGCACAGCAACGCATCTGAGACCCATGCTGACGCTCAGGGCGACCAGTACATGGGCTCTGGTGCCCACCACATCGAGCAGCCAACACTTGGCGTGCTTGAGCAGCAACCGGAGCGCCAAGCGGAAGAATCAGTGGAGTCGGAGTACGAACCTGTGCAATCGAAGCTCCCGCTTCCAAAACAAAGACCTGCTGTCGACGAGAGCGCCATCGAAGAGGCCCGGAAACAGGCGCGCCTCAGCGCCAACGGAACTGGCACGCTGCCGTCTGTCTGCTTCTTCACACTCACGCACACAAGCGGCAACCTGTGCGCTGCAGACGCCTCCAGCTCGGGATCGTACGTTGCTGGTGGCTTTGACGACAGCACAGTGAAGCTTTGGGATGTGGAGAATGCACCTGCTGCAACGCGACAGAGCGGCAAAGGCGAGCACCCCATGCCGCACTCACGCTTGTGCGGCCACTCTGGCCCTGTGTACGGTGTCTCTTTCTCACCGGACCAGGAGTTCTTGCTGTCCGGCGCATTTGAAGGCGGCGTCCGCTTGTGGCACTGTCGCGAGCGCCTGGCGCTTGCCCGATACGACGGCCACCGCAACCCTGTGTGGGACGTCGCGTTTAGCCCCGTGGGGCACTACTTTGCGTCCGCGTCCCACGATCACACTGCTCGTGTCTTCTCAGCCGACTGCGAGCACGCTCGCCGCGTTTGTGCTGGGCACACAGCCGACGTCGACTGTGTTGCATGGCACCCGAGCTGCAACTACATTGCCACAGCTTCGTGCGATCGAACGGCGCGGCTGTGGGACGTGCACTCGGGCGAGACTATGCGCATCTTCGCCGGGCAGCTCTCGATGCTCACCTGCATTGCTTGCTCGCCAGATGGCAAGGAGATTGCTGTGGGTGCTGAGGATGGCTCTGTCTCAGTGTGGGACATTAGCTCCGCGAAGCGACGGCTGCTCTTGCGCAAGCATGCGGGCGCTGTCTGGAGTGTTGCATATTCAAGAGATGCAACGGTGCTTGTCTCGGCTTCAGAGGATTGCAGCCTTGCCATTTGGGACGCGTCAACAGCGGGCGCGAGCTCTGAGGGGAACGAGCAGCAGGCGACGAAAGGCGGCAGCAGCGCAGAGGTGCGCGCTGCAGCCATGAGCCTACCAACGAAAGCGGCTGGTGTTGCGGCAGTAACGTTCACGAGACGAAATCTGTGCTTGGGCATTGGGCCCAGATGA
PROTEIN sequence
Length: 464
HLQHSDNTIALSILNDNLSVHPRDGEPDSLEEQPEDPRDPSARLGVPVHPLPQSQRWGEHSNASETHADAQGDQYMGSGAHHIEQPTLGVLEQQPERQAEESVESEYEPVQSKLPLPKQRPAVDESAIEEARKQARLSANGTGTLPSVCFFTLTHTSGNLCAADASSSGSYVAGGFDDSTVKLWDVENAPAATRQSGKGEHPMPHSRLCGHSGPVYGVSFSPDQEFLLSGAFEGGVRLWHCRERLALARYDGHRNPVWDVAFSPVGHYFASASHDHTARVFSADCEHARRVCAGHTADVDCVAWHPSCNYIATASCDRTARLWDVHSGETMRIFAGQLSMLTCIACSPDGKEIAVGAEDGSVSVWDISSAKRRLLLRKHAGAVWSVAYSRDATVLVSASEDCSLAIWDASTAGASSEGNEQQATKGGSSAEVRAAAMSLPTKAAGVAAVTFTRRNLCLGIGPR*