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qh_8_scaffold_10725_3

Organism: QH_8_Viridiplantae_55_7

partial RP 19 / 55 MC: 8 BSCG 16 / 51 MC: 4 ASCG 12 / 38 MC: 4
Location: 1243..2790

Top 3 Functional Annotations

Value Algorithm Source
SigA (ISS) n=1 Tax=Ostreococcus tauri RepID=Q017N3_OSTTA similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 497.0
  • Bit_score: 280
  • Evalue 2.50e-72
RNA polymerase sigma-70 region 2 {ECO:0000313|EMBL:CEF98266.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.6
  • Coverage: 497.0
  • Bit_score: 280
  • Evalue 3.50e-72
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 469.0
  • Bit_score: 245
  • Evalue 2.50e-62

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Taxonomy

Ostreococcus tauri → Ostreococcus → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1548
ATGCTCAACGAGTCCGAGCTTGGCCTTATTGTGCGCGTTCTCTCTCGCTCTAGCCAACTCGCTGCTTCGCACTGCCCAAGTGAACGCCTGTTGTGTCTCCATATCTGCACACCTGCTTTACAGGAGGACGGTGAAGGTGTAAGCAGTAGCAGCAGCAAGAGGAGAAAGCAGTCCGTCAGCTCTGGCAGTCGCCCCAAGAAGCGGAACTCCAGCAGCAGCTTCTCCTCCTCATCAAGCAAGCATAAGCAAGCGGAAAGCAACAGCTCACTCAATGCTGATTCCTCTTCCCAAGCAAACAAACGCAACACCAGTGGGCAAGCAGCCGCTTTTCCGTCCACTTCTGATCGCGAGCAAGCACGCCAGGCTGCTGCCTCACGGAGCGAGCGTATGGCGCAGACACGATCCTTTGGCATGTCTTCTGCTTCCTCCGCCGTCAATGGCAAGAAGCGCACTGGCAGGGGGGCCAAAGCTAAAAAGAGCGTTGAAGAAGATGGCCTCAGTTTTGATGAGCAGCCTGTGACTGGGCAGCAACAGAGCCACTTCTCGCACTACCTTGCCGAGGTAGGAAAGACAGCGTTGCTTGACAAGAGCGACGAGTTGCGATTGTGCAAACAGATCCAGGCGCTCGAAAAGATGGAGTCTGCTCGCGACGAGCTCGCCAACCAGCTTGGCCGCACGCCCTCCGAGAGCGAGTGGGCATCTGCGTTTGGTTATGAGAGTGTCCAAAGCTTCCGAGAGCATCTGGACGACTGTCGCGAAGCAAAGAACCGGATGATTCGAGCGAACATCCGGCTTGTGGTCAACTTGGCACAGAGGTACAATACGAGCAACAATCTCGCACTTTCTGACCTTGTTCAGGAGGGCACTATGGGCCTCATCAAGGCTGCTGAAAAATTCGATGCCACCCGAGGCTTCAAATTTTCCTCGTACGCACATTGGTGGATCCGGCAGCGGCTGAGCAGCTCGCGCGAGTACATCAACACAATTAGAGTTCCAAACCACGCGTTGCAGCTCGTTGGAAAGCTTTCGCAGGTGCAAAGCGACTTTGAAATGGAGAATGGGCGGCAACCAACCAATGAGGAAGCTGCTGAAAGGCTCGGAGTGAGCGTGTCCAAGGTTGAGACTCTGAAGCGATCTGGTTCAGGCTCCGTCTCCCTTGACCAGGAGTTTTCCGACAGAGATGGCGATGGAAATGGCGCGCTTAGTGAAGTCACGGCGGACCCAAGCGTGTCTGAGCCAGCTGAAGAAGCGGACGACATGCTGCGGAGCAGGTCATTACGAGATGTGTTGAATACTCTTGAGACGAGAGAGCGAGATGTCATTGTGTTGCGATATGGTCTCGATGACGGAAGGCCGCGAACATTGTACAACATAGGAAAGCGATTCGCGGTGACGAGAGAACGCGTACGGCAGATCGAGCGGAACGCCCTTCGCAAGCTGAAGTCGCCATCACGCTCGCGTACGCTAACTGACCACGCACGCTGGGCTGGAATCTCGCCAAGCGACATTATAGCCGCCACATCAGTCCCACCGGTTGACGATTTTTAG
PROTEIN sequence
Length: 516
MLNESELGLIVRVLSRSSQLAASHCPSERLLCLHICTPALQEDGEGVSSSSSKRRKQSVSSGSRPKKRNSSSSFSSSSSKHKQAESNSSLNADSSSQANKRNTSGQAAAFPSTSDREQARQAAASRSERMAQTRSFGMSSASSAVNGKKRTGRGAKAKKSVEEDGLSFDEQPVTGQQQSHFSHYLAEVGKTALLDKSDELRLCKQIQALEKMESARDELANQLGRTPSESEWASAFGYESVQSFREHLDDCREAKNRMIRANIRLVVNLAQRYNTSNNLALSDLVQEGTMGLIKAAEKFDATRGFKFSSYAHWWIRQRLSSSREYINTIRVPNHALQLVGKLSQVQSDFEMENGRQPTNEEAAERLGVSVSKVETLKRSGSGSVSLDQEFSDRDGDGNGALSEVTADPSVSEPAEEADDMLRSRSLRDVLNTLETRERDVIVLRYGLDDGRPRTLYNIGKRFAVTRERVRQIERNALRKLKSPSRSRTLTDHARWAGISPSDIIAATSVPPVDDF*