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qh_8_scaffold_20253_1

Organism: QH_8_Viridiplantae_55_7

partial RP 19 / 55 MC: 8 BSCG 16 / 51 MC: 4 ASCG 12 / 38 MC: 4
Location: comp(3..533)

Top 3 Functional Annotations

Value Algorithm Source
Histone deacetylase (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J7G9_CHLRE similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 179.0
  • Bit_score: 139
  • Evalue 3.10e-30
Histone deacetylase {ECO:0000313|EMBL:EDP00102.1}; Flags: Fragment;; TaxID=3055 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 179.0
  • Bit_score: 139
  • Evalue 4.40e-30
histone deacetylase superfamily protein similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 176.0
  • Bit_score: 92
  • Evalue 1.20e-16

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Taxonomy

Chlamydomonas reinhardtii → Chlamydomonas → Chlamydomonadales → Chlorophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 531
ATGCGCCGCATGGTTGCTGGCACTGTACTTGCTTCCGCTATCGCGCTCAAGCGCAACAGCTACGCGATCAACTTGGGCGGTGGCATGCACCATGCAGAATTCGCTCGAGGCAAAGGCTGGTGCCTATTCCGTGACATCTCAGCAGCGATCGTTGAGCTCACAGAAGCGCTCGACCAGCCTCTTAGAATCTTGTACATAGATGTTGACGTTCATCAGGGAGACGGCGTTGAGCTCTGGAAGGCCGATGGGTTACCAGGAGCATGCGATGGGACCACCTTGTCAATATGCGATATCTTTAACCCTTCTCTTTTTCCAGGAGATCGCTACGCAGAGAGATTCGCGGACATAGCTGTTCGATTGGAGCCTGGATGCGATGGCCCGTCATACATGCAAAAGCTGCGCAGCGCGCTTGAGCAGGTATTTGAAAAGCGCGCTCAGTATGACTTGTGCATCTACAACGCCGGCACAGACACATTGGCCGGTGACCCATTGGGAGGTTTGAATGTACCACACGAGGTTCTTGTGGAACGC
PROTEIN sequence
Length: 177
MRRMVAGTVLASAIALKRNSYAINLGGGMHHAEFARGKGWCLFRDISAAIVELTEALDQPLRILYIDVDVHQGDGVELWKADGLPGACDGTTLSICDIFNPSLFPGDRYAERFADIAVRLEPGCDGPSYMQKLRSALEQVFEKRAQYDLCIYNAGTDTLAGDPLGGLNVPHEVLVER