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qh_9_scaffold_7925_1

Organism: QH_9_Viridiplantae_55_6

partial RP 14 / 55 MC: 1 BSCG 8 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(728..2185)

Top 3 Functional Annotations

Value Algorithm Source
RNA recognition motif (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01B63_OSTTA similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 509.0
  • Bit_score: 286
  • Evalue 4.30e-74
Nucleotide binding,nucleic acid binding,RNA binding {ECO:0000313|EMBL:EOY27481.1}; TaxID=3641 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; similarity UNIPROT
DB: UniProtKB
  • Identity: 35.4
  • Coverage: 494.0
  • Bit_score: 289
  • Evalue 7.10e-75
RNA recognition motif (ISS); K14787 multiple RNA-binding domain-containing protein 1 similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 509.0
  • Bit_score: 286
  • Evalue 1.40e-74

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Taxonomy

Theobroma cacao → Theobroma → Malvales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1458
CTACACAAGGCGACATTACAGCCACGTGGCATCGCATACGTGACGCTCGACTCATCAGAAAGTACAGACAAAGCGCTCCAGAGCACAAACAACGCTATCATGCAGGGCAGAATTGTGAGCGTCTCGCGTGCGACGTCCAAGTCGCCGACGAACTCATCCGCTCCAAAGGAGAAAAGCGGAGGCACCTCATCGTTCAAGCGGCAGCAAGAGGCTGATAAAGAGAATCAAGCGCGTAATCGCCGCGCATGGAACGCGCTCTTTCTTCGGCAAGACGCCGTCGCCGACGCGATCGGTGATCGCCTCGGCATGTCGAAAGCAGACGTGCTCAGCCCGGAAAGCAGCGGCTTGGCAGTGAAGCTGAGTATCGGCGAGGCTGAGATCATTAACGAAGCCAAAGAGTCGCTCTCGCAGCAGGGTGTTCATGTGTCGCTGCTAGAGCGCGCTGCAAACTCTGCTGGTCCTGATCCTGATAGAAAGGAAACTCTTCAGCGCTCAAGCACCACGCTGCTGCTGAAGAATCTTCCGTACTCTGCCAAGCGAGACGAAATTGCGTCAATCTGTGAGAGAAGTGGGAGCTTGTTGCGACTTGTGCTGCCGTCGACTGGAATGATTGCAATTGCTGACTTTGCAGATGCTGCAGATGCGAAGAAGGCGTTCAAGAAACTTGCCTTCAGGAAGTTTGGCAGCAAGCCAATCTATGTCGACTTCGCGCCAGTAAACACGCTTGCAGCGGCTGATTCAATGCAAACTGCAGCTGCGGGAAAGGCTCAGAGCACGCGCGAGATTACGACGGCAACGCTGGAGCCAGTTGAAGCAGGAGATGGTTTCGATCAAGAAGCCGAGAGCAGGACTATCTCTGTCAAAAATGTTCCTGTGAATGCGGCGAGTGACCAAATTCGCTCACTGGTCGAGCGGGCTGGCGCTGTTGGTGGTGTGCAGTCAGTGAGGCTTGAGTCAGAACGCAACCTGCGAAACTCGAAGCAAGCAACGGTTGAGCTTTCTAGGAGTTGCAAGACGAGCGCGTCTGCTGTTGCAAAAGCGCTGACGGGATCGTCGCTAGGAGCGAGGCAGTTGTACGCAAGAGTGAAGCCAACCGTTGATGCGCTGACTGAAGTTGCTGACGGAGTGGGCGGGGCGGATGCCAAGCTGCAGGAGCCAAAGCTGCTTGTGCGCAACGTGCCGTTTGAAGCGAAGAAGAGCGAAATCAGGGAGCTCTTCAAGCCTTTCGGAACTGTGAAAGCAGTGCGCTTGCCGAAGAAGGTGGGCGGTTCGCACAGGGGCTTTGCGTTTGTTGAGATGGGATCAAAGTCAGAAGCGAAACAGGCGATGCGCGCAGTGAAGCAGGTGCACTTTTATGGAAGGCACCTCGTGGTTGAGGGCGCGAAGCAGGCTGAAGGTGTCGAGGAGCTTAGGGAACATGCTAAACGCGTCGCTGATGCTCAGCCAGATGTTGGGTGA
PROTEIN sequence
Length: 486
LHKATLQPRGIAYVTLDSSESTDKALQSTNNAIMQGRIVSVSRATSKSPTNSSAPKEKSGGTSSFKRQQEADKENQARNRRAWNALFLRQDAVADAIGDRLGMSKADVLSPESSGLAVKLSIGEAEIINEAKESLSQQGVHVSLLERAANSAGPDPDRKETLQRSSTTLLLKNLPYSAKRDEIASICERSGSLLRLVLPSTGMIAIADFADAADAKKAFKKLAFRKFGSKPIYVDFAPVNTLAAADSMQTAAAGKAQSTREITTATLEPVEAGDGFDQEAESRTISVKNVPVNAASDQIRSLVERAGAVGGVQSVRLESERNLRNSKQATVELSRSCKTSASAVAKALTGSSLGARQLYARVKPTVDALTEVADGVGGADAKLQEPKLLVRNVPFEAKKSEIRELFKPFGTVKAVRLPKKVGGSHRGFAFVEMGSKSEAKQAMRAVKQVHFYGRHLVVEGAKQAEGVEELREHAKRVADAQPDVG*