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cn_combo_scaffold_5757_6

Organism: CN-SCN_Verrucomicrobia_15x

partial RP 9 / 55 BSCG 9 / 51 ASCG 1 / 38
Location: 8705..9898

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCZ4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 377.0
  • Bit_score: 470
  • Evalue 1.30e-129
xylR; xylose operon regulatory protein; K02529 LacI family transcriptional regulator Tax=RifOxyA12_full_Lentisphaerae_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 376.0
  • Bit_score: 539
  • Evalue 5.50e-150
AraC type helix-turn-helix-domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 388.0
  • Bit_score: 426
  • Evalue 1.10e-116

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Taxonomy

RifOxyA12_full_Lentisphaerae_48_11_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1194
ATGGTTCAATCCGTCATTCAATATTCCACCGTGAATCCACCGCCAAAAGTTGCGCTGCTGATTGAAACCTCGAACGCCTATGCGCGAAGTTTGCTGCGGGGCGTCGTCGGCTACATTCGCGAGCATCAGCCGTGGTCCCTGTTCCTTTCGGAGCATACACGTGGCGACAAAACGCCGCAGTGGCTGAAGGGCTGGCGAGGCGATGGAATTATCGCACGTGTTGAAAACGCCGCCATCGCGGAAGCCCTGCGCCCCATTCGGCTGCCGATTGTGGACATGAGCGCGGCGCGGTTACTGCCTTCGCTGCCGTGGTTTGAAACGGATGATGGCGCCATTGCCCACATTGCCGTTGAGCACCTGGTGGAGCGAGGATTTACCAACCTCGCCTTCGTGGGGGACAGCCAGTTCAACTGGTCCAAATGGAGGTGTGAACATTTCGAGAATTCGGTCCGGGCAGCGGGCCACAACTGTTTCGTCCTCGACATCGGGAAGAAGAAAAAAAGCGAAGAGGAAGGCTTGCGACGAATTGCCGAGTGGGTCCGTGAACTTCCGAAACCGGTGGGAGTCATGGCCTGCTACGATTTCACCGGCCAACAAGTCCTGGATGCATGTCGTCGGCTGGATATTGCCGTGCCGGATGAAGTGGCGGTCATCGGAGTCGACAACGACGAACTGCTCTGCGAATTGAGCGACCCGCCTTTATCAAGCGTCATCCCGAATACCTACCGCACCGGCTATGAAGCGGCGGCGTTGCTCGATCAAATGATGGGCGGCAAAATCGTAAAAGGCGAAACCCACTTGATCCCGCCCCTCGGAGTCGCCACGCGCCAATCCACTGATGTGCTGGCAATCCACGACCGGAATGTGGCGCGGGCGATCAATTACATTCGCAAGAACGCGTGTAACGGAATCAATGTGCAGGATGTGATCCGGGCGGTGCCGCAATCGCGCCGGTTATTGGAAAAGAAGTTCAAAAAGCTTCTTGGCCGAACGCCGCATGACGAAATCTTTCGGGTGCAATTGGAGCGGGTGCGGCAGTTACTGACTCAAACCGACCTTTCGCTGGAACAAATAGCGGAGCGGACCGGTTTCACCCATGTGGAATACTTAAGCGTGGCGTTCAAGCGAGAACTGGGAATTCCCCCCAGCCGTTACCGGGCGGTCAACCGGCCCAAGGCAAATCCGAATCCGTAA
PROTEIN sequence
Length: 398
MVQSVIQYSTVNPPPKVALLIETSNAYARSLLRGVVGYIREHQPWSLFLSEHTRGDKTPQWLKGWRGDGIIARVENAAIAEALRPIRLPIVDMSAARLLPSLPWFETDDGAIAHIAVEHLVERGFTNLAFVGDSQFNWSKWRCEHFENSVRAAGHNCFVLDIGKKKKSEEEGLRRIAEWVRELPKPVGVMACYDFTGQQVLDACRRLDIAVPDEVAVIGVDNDELLCELSDPPLSSVIPNTYRTGYEAAALLDQMMGGKIVKGETHLIPPLGVATRQSTDVLAIHDRNVARAINYIRKNACNGINVQDVIRAVPQSRRLLEKKFKKLLGRTPHDEIFRVQLERVRQLLTQTDLSLEQIAERTGFTHVEYLSVAFKRELGIPPSRYRAVNRPKANPNP*