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cn_combo_scaffold_9850_1

Organism: CN-SCN_Verrucomicrobia_15x

partial RP 9 / 55 BSCG 9 / 51 ASCG 1 / 38
Location: comp(2..523)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00038133AE similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 166.0
  • Bit_score: 216
  • Evalue 2.00e-53
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:EEF61228.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivisi similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 165.0
  • Bit_score: 210
  • Evalue 2.00e-51
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 167.0
  • Bit_score: 130
  • Evalue 5.20e-28

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 522
ATGCATAACGCGGCGTTGGAAGAGCTTGGTTTCAATTGGCGTTATCTCGCTTTTGATGTGCATCCGGACTCATTGCGCGAAGCGTTGAATGGGGCCAAAGCGATGAAATTCGCGGGATTAAATCTCACTGTGCCGCACAAAATCCTGGCCGTGGAAATGATGGAGGAGTTGGATGAATCGGCGCGCGAATGGGGAGCGGTGAACACGGTTTTATTTGAGGGTGAGAATGGGGACGGGAATTGGCAGCGATTATGGGAATGTGATCCAGGAAGAGTTCAGGGGATTCGAATGCGGGGATTTAATACCGATGCGGATGCGATTACGCGGTCGATTGAGGAGGACCTGGGAATTCAACTGGAAGGTGCATCCGTGCTGCTGCTTGGTGCTGGAGGGGCGGGAAGGACAGCGGCATTAAAGCTCGCGGCTAGCGGAGTGAAATCGTTGCCCCTCGTCAATCGAACACAATCGAAAGCGGAAGCGGTGGCGCGAGAGATTGCGGAGCGCGGATTCGCGATTGAGGCG
PROTEIN sequence
Length: 174
MHNAALEELGFNWRYLAFDVHPDSLREALNGAKAMKFAGLNLTVPHKILAVEMMEELDESAREWGAVNTVLFEGENGDGNWQRLWECDPGRVQGIRMRGFNTDADAITRSIEEDLGIQLEGASVLLLGAGGAGRTAALKLAASGVKSLPLVNRTQSKAEAVAREIAERGFAIEA