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cn_combo_scaffold_9850_2

Organism: CN-SCN_Verrucomicrobia_15x

partial RP 9 / 55 BSCG 9 / 51 ASCG 1 / 38
Location: comp(771..2249)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBA8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 477.0
  • Bit_score: 495
  • Evalue 8.10e-137
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:EEF62793.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verr similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 477.0
  • Bit_score: 495
  • Evalue 1.10e-136
RND transporter similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 483.0
  • Bit_score: 371
  • Evalue 5.00e-100

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1479
ATGAAAAGTGCATTACGGGCAGGCGCGGCAGGGTTCGTGGCGTTGCTGCTGGGCGGTTGCATGGTGGGTCCGAAGTATGAGCGCCCGGAACCGCTGCCGGGCGGAAGATTGCCGGAAGCATTTAACGAGGCAGAGACGTTAGGCAATTCAAGCGCGACCAATGCTGCGCTTTGGAAAAGTGCTGAACCTTCGGCGCATTTGTCGCGGGGGAGTTGGTGGAGTGTATTTGGGGACGCGGAGTTGAACCGGCTGGAAGGGCTGGCAACGGAGCAAAACCAGGAACTTGCAGGAAGCCTTGCACGACTCGAACAAGCGAGGGCGCTGGTGACGGTTGCCCGGTCGGATCTTTTCCCGCACTTCAACTTTTCGCCTAGTTTTAATCGCCAACGCACGAGCGCGAACAGTTTTGATCGGGGACAGGCGGCTGGCGTTTCGCATAGCTACAACACACTTTTTGTGGGAGCAGATGCGGAGTGGGAGTTGGATTTATGGGGGCGGGTGCGCCAGCAGGTGAGCGCGGCCCGAGCGCGCCTTACAGCGAGTGAAGATGATTTGGAAGCGGCGCGGCTCTCAATCCAAGCGGAGGTTGCGACCGATTATTTTTCGCTGGTGGCGCTGGAATCTGAATATGCGTTGATCCAGAAAACGATCGAATCATTTCGTCGATCCTTTGACCTGACTGTTAACCGGCGCAAGGGGGGAATTGCGAGTGATCTTGATGTTTCCCAGGCGGAAACACAATTGAAAGCTGCCGAGGCGTTGTTGCCAGCGATTGAACTGGAGCGAGCGCGAGTGTTGAATGCATTGGCGATGTTATGCGGCGAAACTACAGCGCAATTCAAAGTGCAGATTCCAGCCGGATTTCAACTGTTGCCGCAAGCGGTGACTGCGCTTCCGAGTGAATTACTGGAAAGGCGCCCGGACGTGGCGGCGGCGGAGCGTCGAATGGCCGCTGCAAATGCGGATGTCGGAGTGGCGAAGACGGCGTTTTATCCGCGAGTGACATTTCATGGCCTTGCCGGATTGCAATCGATTGATGCGGGTTCGGTATTCAATTGGCCAAGCCGGGTTTGGGCTTTTGGACCCACGTTGCAATTGCCACTTTTTACCGGCGGACGAAACCGCGCGGAACTGGCGTTCAGCCGGGCGGGATATCGCGGGACGGTTGCGGACTATCGTCAATCCGTGCTTGTGGCTTTTCGGGAAGTGGAGGACCAACTCGCAGCGCAACGCTTGTTAGCGGAGCAATTCGGGGCTGAACAAGCGGCGCTCAATTCGGCGCGGCGGACGCTGGAAATTGCGGAGAACCGTTACAAAGCCGGATTGGTCACCTACCTGGAAGTGGCGACTGCCCAAAGCGCGGCACTGGATCGGGAGCGAAGTTTGGTTCGGCTCAGTTCGGAACGGTTGACGGCGCAAGTGGCATTGATCAAGGCATTGGGTGGAAGCTGGGAGCGGACGGATGTTGCCAGCCGGTGA
PROTEIN sequence
Length: 493
MKSALRAGAAGFVALLLGGCMVGPKYERPEPLPGGRLPEAFNEAETLGNSSATNAALWKSAEPSAHLSRGSWWSVFGDAELNRLEGLATEQNQELAGSLARLEQARALVTVARSDLFPHFNFSPSFNRQRTSANSFDRGQAAGVSHSYNTLFVGADAEWELDLWGRVRQQVSAARARLTASEDDLEAARLSIQAEVATDYFSLVALESEYALIQKTIESFRRSFDLTVNRRKGGIASDLDVSQAETQLKAAEALLPAIELERARVLNALAMLCGETTAQFKVQIPAGFQLLPQAVTALPSELLERRPDVAAAERRMAAANADVGVAKTAFYPRVTFHGLAGLQSIDAGSVFNWPSRVWAFGPTLQLPLFTGGRNRAELAFSRAGYRGTVADYRQSVLVAFREVEDQLAAQRLLAEQFGAEQAALNSARRTLEIAENRYKAGLVTYLEVATAQSAALDRERSLVRLSSERLTAQVALIKALGGSWERTDVASR*