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cn_combo_scaffold_1998_27

Organism: CN-SCN_Verrucomicrobia_15x

partial RP 9 / 55 BSCG 9 / 51 ASCG 1 / 38
Location: 25692..27029

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3D6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 231.0
  • Bit_score: 181
  • Evalue 1.40e-42
RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 232.0
  • Bit_score: 181
  • Evalue 6.60e-43
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 231.0
  • Bit_score: 181
  • Evalue 1.90e-42

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Taxonomy

Faecalibacterium prausnitzii → Faecalibacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1338
ATGATCGTGCGCGTCGAATTCGACATCCTCGACACCGGGCAAATTCTCCGCGAAGCCGACGAAGCAGAACCGAGCTCTCGCGGCAGCGCCCTGGACGCCTATTTCGCCTCGCTCCAGAATTGCCCGAAGATAACTCCTCGGCAGCAGATTGAATTGGCGCGGGATTATCATCGCGAAGTGGTCGCCTGCCGCGACATGCTGGATCAAATTCCCGGGAAGGTCTTCTTTCTGGCTCAGGTGCTGGAGGAAATTCTGAACGGCGAGCGGTTGACGAATTTTTTTCTCCTGCATAACGAAAAGGGAACGCTGCCACCCAGCCGGCCAACCGACCGGTTTCTATTCTTCAAGAATCTGCAGGAGAAGGATTCTTTGAAGAACCCGCGCCTGGCGGATTGGCGCATCCGGCCCAATCTCATCCTCGCCTGGAGTCGTGATCTCATTCGCCGATTCGGGGAAATGCCGCAGCGGCCGTGGATTAGCCGCATCATTCCGGCTCAACGTCAGCCTTTGACGGAACTTGAGCGTTGGGCCGGTTCGGCGAAACAATTGGAAGCAATCAGCGGCCTCCGAATCAATGAGCTTGCCCACCACGTCGGACAGCTCCGGCCGTGCGCCGGGAAGGCCGACTCACTTTTCACGACGCTGGCCGAATGCAATCTGAAGTTGGTGATTCATATCGCCAAGAAATTCCAAAACCGCGGACTGACTCTCGACGATATGATTCAAGAGGGCAACCTCGGCTTGATGAAAGGCATCGAGCGCTTCGACCCGGAGAAGGGATTCAACCTCTCGACCTATGCCGTGTGCTGGATCAAAGAAAGCATCCTGCGCGCGCTGATGACGCAGGGTCACGTCATACGATTTCCACCCGCCCTGCACGAGATGCTGCGCGAAATCCAGAAGCTCCGCGACGCGGCTTCGGCAAACGGAAGTCCCGAACCCGGCGTGGAGGCACTCGCCGGGCAGCTCAAGACCTCCCCGGAAAATGTCGAAGCGGCGCTGTCGCTTTACCAGGTTTGCAGTCTCCACCAGCCGATCAACGGAAGCGAAGAAGCCATCGAGCAGGTGTTGATCGGTGACGAGGGAATTTCTTTCGACGAAAGCGAGACCTTGCGGCAAGCCATTGGCCAACTGCTCGACAGTCTTGCGCCAACCGAAAAACAAGTGCTCCGGCTTCGGTATGGATTGGCGCAGGGTTTTCCCAGGACCGTCGAGGAGATCGCCGCCAGTTGGAAAATCACACGAGACCACGTCCGACAGATCGAAGCCAAAGCCATCGCCAAGATGCGGGCCGATCCGGCCATCCAAAGCGAGAAAGTCCGCTTTTTGCCCACCTGA
PROTEIN sequence
Length: 446
MIVRVEFDILDTGQILREADEAEPSSRGSALDAYFASLQNCPKITPRQQIELARDYHREVVACRDMLDQIPGKVFFLAQVLEEILNGERLTNFFLLHNEKGTLPPSRPTDRFLFFKNLQEKDSLKNPRLADWRIRPNLILAWSRDLIRRFGEMPQRPWISRIIPAQRQPLTELERWAGSAKQLEAISGLRINELAHHVGQLRPCAGKADSLFTTLAECNLKLVIHIAKKFQNRGLTLDDMIQEGNLGLMKGIERFDPEKGFNLSTYAVCWIKESILRALMTQGHVIRFPPALHEMLREIQKLRDAASANGSPEPGVEALAGQLKTSPENVEAALSLYQVCSLHQPINGSEEAIEQVLIGDEGISFDESETLRQAIGQLLDSLAPTEKQVLRLRYGLAQGFPRTVEEIAASWKITRDHVRQIEAKAIAKMRADPAIQSEKVRFLPT*