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cn_combo_scaffold_741_12

Organism: CN-SCN_Verrucomicrobia_15x

partial RP 9 / 55 BSCG 9 / 51 ASCG 1 / 38
Location: comp(9883..10542)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B233_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 208.0
  • Bit_score: 162
  • Evalue 4.20e-37
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EIQ01325.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 208.0
  • Bit_score: 162
  • Evalue 5.90e-37
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 189.0
  • Bit_score: 156
  • Evalue 6.60e-36

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Taxonomy

Opitutaceae bacterium TAV1 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 660
ATGAAGGGAGCGAGCGACCGCGCGCACGCTTTGTCGGCGGCGAGCGAGGATGGGCGTTCCGCGTCCGCCGTGCCTTCGGTCGCCGATGAGCAAGACAGCCTGGACATGGCCCGTCTGGCCTCCGGCCACAATGCTGTGCTGAACGATTTGATGGAGCGCCACGCCGAGCGGCTTTTCCAGTATCTGGTTCGTTCTCTGGAAAACGAGGAGGATGCGGCGGACCTGGCTCAGGAGACCTTCGTTCGCGTTTATCAGAACCGCGCGAAGTTCGACGCGCGCAAGAAGTTTTCCACCTGGCTCTACGCGATCGCCAGCAATCTGGTGCGTGACCGCTACCGCTGGCGCGCGCGTCATCCCAAAGTTTCACTCGATGCGGCAAACGAGGCCACAGGAAATGATTTCGTCGAATCGCTCCCGGAGGAAAATCCTTCGCCAATCGAAACGGTGCAGGCCCGCGAACGGGCCGCAGCCGTGCGCCGAGCGGTGGCCGCGCTGCCGGATCAACTGCGCATTCCGCTGATCCTTTCCGAATACGAGGAAAAGTCACACGCGGAAATCGGCGAAATCCTGCGCTGTTCAGCCAAAGCGGTGGAAGTGCGCATTTACCGGGCACGCCAGCAATTGAGAACAACCCTGAGCGAATTAATGCAAACACTTTAG
PROTEIN sequence
Length: 220
MKGASDRAHALSAASEDGRSASAVPSVADEQDSLDMARLASGHNAVLNDLMERHAERLFQYLVRSLENEEDAADLAQETFVRVYQNRAKFDARKKFSTWLYAIASNLVRDRYRWRARHPKVSLDAANEATGNDFVESLPEENPSPIETVQARERAAAVRRAVAALPDQLRIPLILSEYEEKSHAEIGEILRCSAKAVEVRIYRARQQLRTTLSELMQTL*