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cn_combo_scaffold_5159_7

Organism: CN-SCN_Verrucomicrobia_15x

partial RP 9 / 55 BSCG 9 / 51 ASCG 1 / 38
Location: comp(3012..3611)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Cellvibrio sp. BR RepID=I3ICI1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 27.7
  • Coverage: 159.0
  • Bit_score: 64
  • Evalue 1.40e-07
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1 similarity UNIPROT
DB: UniProtKB
  • Identity: 29.3
  • Coverage: 150.0
  • Bit_score: 67
  • Evalue 3.10e-08
RNA polymerase, sigma 38 subunit, RpoS similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 117.0
  • Bit_score: 64
  • Evalue 5.30e-08

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Taxonomy

Candidatus Entotheonella sp. TSY1 → Candidatus Entotheonella → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGACCGCGCCCCTCACCACAATCTTTGATCCCGAGCACGCCGAGGCCGTCGAGCGCATCCAGGCGAACATGGGCAAGATCACCCTGCACGCCATTTACTTTTCGAAGAGCTTCCATCATCCCATCGAAGACCTGATTGCCGTGGGCCAGCTCGCCATCCTCCGCGCCATGCAAACATTCGATCCCGCGCGCGGCGTTAAGTTCCTCAGCTACGCTGATTTTTTTATAAGGCGCTACATGCAAACAGAGGTGGAGAAGTTCTCCCGCACCGTCCGCGTCCCGCGCCACCTCTTCCACCTTTTTCCCACCCGCGAACAATCACTCGATGACCTGCTCACGGATGATTCCGAGGACACGGCTGAGAAGTTCTTTTCCGTCGAGGAACAAGCCACGAGCTACGCCGAGCGCAACGATCTGCTCGGGCACCTTCCCGCGCTGCTCGCCCGGCTGTCTCCGGTGGATCGCGGAGTCATCCAACTCTGGCTTGCAGGGCGCAAGGATGCCAACGTTGCCGCCCGGTTCCACGTCACCCAACAGGCCATCAGTCACCGCCGCAGAAAAGCTTTCCGCCAACTCCGCCAATGGTTTGATGAATTATGA
PROTEIN sequence
Length: 200
MTAPLTTIFDPEHAEAVERIQANMGKITLHAIYFSKSFHHPIEDLIAVGQLAILRAMQTFDPARGVKFLSYADFFIRRYMQTEVEKFSRTVRVPRHLFHLFPTREQSLDDLLTDDSEDTAEKFFSVEEQATSYAERNDLLGHLPALLARLSPVDRGVIQLWLAGRKDANVAARFHVTQQAISHRRRKAFRQLRQWFDEL*