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cn_combo_scaffold_10925_3

Organism: CN-SCN_Verrucomicrobia_15x

partial RP 9 / 55 BSCG 9 / 51 ASCG 1 / 38
Location: 3242..5185

Top 3 Functional Annotations

Value Algorithm Source
DEAD/DEAH box helicase domain-containing protein n=1 Tax=Pseudomonas syringae Cit 7 RepID=F3H533_PSESX similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 654.0
  • Bit_score: 378
  • Evalue 1.90e-101
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:EGH54446.1}; TaxID=629264 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 654.0
  • Bit_score: 378
  • Evalue 2.70e-101
putative ATP-dependent helicase similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 645.0
  • Bit_score: 370
  • Evalue 1.10e-99

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Taxonomy

Pseudomonas syringae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1944
TTGCGTCGCAATCCTGGCGGCATTTTACTCATCACACCAGAATCGCTGGAATCCAATTTCATTAACTACGGTTCGCAAGTGCCACGGTTGTGTCGCGAATTGGAATTCATCGTCATTGACGAAGTGCATTCGTTCCTTGGCAATGTGCGCGGCATCCACTTGCTCAGTCTGCTCTCACGTCTTCGCGCCGCGACCGGCCGCCAGCCTAGAATGCTCGGCCTTTCCGCCACACTCGGCGATCCTGAAATGGGAAGACGCTTTCTCGCGCCTGATGCAATTCCGACCGTCACTCTTATCCAGGAAACAAACGCCGGACGACAGGTCCGTTTCGCGCTAAAGGCCGTTCTTAAACGGCCAGACAGCAGCAAGGCCGGTGAAGCGACACCTCGGTTATCATCCGCGGAGGTCACGAAGTTCGTCCGCGGCAAGTCCGCGGAGCAACTACTTTCAGCCGGTGAATCGCCTGTCGCCGAAAACATGACTTCCGCGTCAACCGCAGCTTCGACTCCTGCCGACGACCTCGACGATATTGCGGACGACATCGTTCGACATTTCACCACTTCTACGAACCTCATTTTCGTGAACTCCCGGCGCACCGCGGAAGAATTGGCGGTTCGCGCGCATGACCGCGTGACCAAGCTAAAATGGCCGCATGATCGGTTCATGATTCATCACGGCTCCGTTGCCAAAGAAATGCGTGAGGAAACCGAGGCTGCGTTGAAAAGCGGTGTTCCTACAACCGCCATTTGTTCCAGTACGCTCGAAATGGGCATCGACATCGGCTCTGTTCGAACCGTCGGCCAGATTGATCCGCCGTGGAGTGTTGCGTCTCTGATCCAGCGTCTTGGCCGCTCCGGTCGTCGAGAAGGCGAGGCGTCAGTCATGCGCCTTTACGTGCGGGAGGAATCGCCACACTCGCGGAGCCGGCTCACCGACCTGCTGTTTCCTGACCTCTTGCGAGGTATCGCACTCACCCGCCTCATGCAGCAGAAATGGCTCGAACCCGCCGATGAACAGCGGATGCATTTGAGCACGCTGGTCCATCAAATCTTCAGCCACTTGAAGCAAATGGGTGGAATGACTGCCACGAAACTTCACGCGTCACTCGCGGTGGACGGCCCGTTTCGCTCTATTAACGAAACGGACTTCGCCGCAATCCTGCGCAACCTCGCGACCAAGCAGCTCATTGAGCAAATTCCAACCGGCGAAATCATCCTTGCTCCGGCTGGCGAGCAAATTACTTCCGCTCATGATTTCTACGCCGCATTTAAGAGCACCGAAATGTTCACCGTTCGCCATGACAAAATGCAAATCGGTGAGCTACCACTGGACGCCCTTCCTCCAGCGGGGCAAGTCGTCGTCCTCGCGGGACGACGATGGCTGGTGCAGGAGATCGATCCTGCCTCCAAGACGGTCTGGGTTTCCCCGGCCAGGGGCGGAAAGGTTCCTGTCTTCCTCGGTAACGGGGGTGAACTGCACACCCGCGTCGTTCAGGAGATGAGAGCCGTCCTGCTCGAGACTGACGAGCCGAACTACCTCGATCAACCCGCTCGTGACCTCCTCAAAGCCGCCCGTCATGTCGCCCGGAAAGTTGGCCTCGACAAAGCGGAATTGCTGGCAGCCTCTGGCGGTGTGCGTTGGTTTCCCTGGGTTGGCACCCGCTGCTTGCGCACCCTTTCCATTCTCGCCGAACTGAACGGCGTCGCTTGCGAAACGGACCGGCTCTCCCTGTGGCTGCCGCTTGCTAACGGTCAAAACTTCGCCGGTTTTTGCCAACAACTACTAAACGCCAACTTTACCCCCCACGCCGTCGGCTCAAAAGTAACACCACGCTCAGTCGAGAAGTACGACGACCTCCTCCCAGATGATTTGCTGACCAAAGCGTGCTTCACCGAGCGTCTAGCTTTAAAGGAGGCTTTAGCTTCCATCAAAGGCGGCTGTTAA
PROTEIN sequence
Length: 648
LRRNPGGILLITPESLESNFINYGSQVPRLCRELEFIVIDEVHSFLGNVRGIHLLSLLSRLRAATGRQPRMLGLSATLGDPEMGRRFLAPDAIPTVTLIQETNAGRQVRFALKAVLKRPDSSKAGEATPRLSSAEVTKFVRGKSAEQLLSAGESPVAENMTSASTAASTPADDLDDIADDIVRHFTTSTNLIFVNSRRTAEELAVRAHDRVTKLKWPHDRFMIHHGSVAKEMREETEAALKSGVPTTAICSSTLEMGIDIGSVRTVGQIDPPWSVASLIQRLGRSGRREGEASVMRLYVREESPHSRSRLTDLLFPDLLRGIALTRLMQQKWLEPADEQRMHLSTLVHQIFSHLKQMGGMTATKLHASLAVDGPFRSINETDFAAILRNLATKQLIEQIPTGEIILAPAGEQITSAHDFYAAFKSTEMFTVRHDKMQIGELPLDALPPAGQVVVLAGRRWLVQEIDPASKTVWVSPARGGKVPVFLGNGGELHTRVVQEMRAVLLETDEPNYLDQPARDLLKAARHVARKVGLDKAELLAASGGVRWFPWVGTRCLRTLSILAELNGVACETDRLSLWLPLANGQNFAGFCQQLLNANFTPHAVGSKVTPRSVEKYDDLLPDDLLTKACFTERLALKEALASIKGGC*