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cn_combo_scaffold_5612_17

Organism: CN-SCN_Verrucomicrobia_15x

partial RP 9 / 55 BSCG 9 / 51 ASCG 1 / 38
Location: 12327..13271

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCC3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 311.0
  • Bit_score: 322
  • Evalue 4.60e-85
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEF62591.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera. similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 311.0
  • Bit_score: 322
  • Evalue 6.40e-85
araC; AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 296.0
  • Bit_score: 196
  • Evalue 8.20e-48

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 945
GTGTGTCCGCCATTTGCGGAAGCACCGGCCTGGAAAACTGTCGGGCCGGGTTGGCGTCCACTGTTCGGCAGTTTCCATGATTTAGGTTTTAGTTTCGAGTGGCACGACTTCACGACCAGGGAGGATCTGGATTGGGCGCGAAGCTTTCATCCAGGCAGCGTCGAGTTGTGTCTGAATCTCGATGGCACAGGTGCGTTGTCCGACGGTCGGAACAAGGTTGAACTGTTGCCGGAGAGTTTCGCCTTTTACTTTCAAGGGCAGCCGCCGCTGGTGGCCACCCGCCGCGCGGGAGAGCGGCATCGGTTCATAACCGTTGAGTTTGCTCCCGCGTTTCTGAAGGAGCATTTCCAAAAGCGGCTTGCGGATCTCCATCCGCTGGTGCGCGGAGTCGTGAGCGGCGAAGCAGCCGGGTCGCTGGTAACAACACCCGAACGGCTGGTGCTCACGTTGCGGCAATTGGTGGAAAGCCTCCGGAACTGTCCCGTGTTCCGGCCCGCGCAGGAAATGTGGTTTCGGAGCAAGGCACTGGAGATCGCCGCGCATCTGTTCTTCCAGCCCGCCGGCGGGGAATTGCTCTGCACGCGCACACAGCGGCTGGCACGCGAGCGAGTCGAAAAGGCCAAGCAAATTTTGAAAGAGCAAATGCAAAATCCTCCTTCGCTGGAGGAATTGGCGCGGATGGTCAATTGCAGTCCGTTTTATCTGAGTCGGCAGTTCGCGCAGGCAGGCGGCATGACGATGCAACAGTTTCTGCGGCAGATCCGCATGGAACGGGCGGCGGAACTGTTGCGTACCGGCAAATGCAATGTCACCGAAGCGGCGATGGAAGTGGGCTACAACAGCCTGAGCCATTTCAGCAGCGCGTTTCACGAGACGTTTGGATGTTGCCCCGGATTGTATCCGTTGCGCACCGAGGCGCAGCAGGTGGTCCTGTCAAAGCGATAG
PROTEIN sequence
Length: 315
VCPPFAEAPAWKTVGPGWRPLFGSFHDLGFSFEWHDFTTREDLDWARSFHPGSVELCLNLDGTGALSDGRNKVELLPESFAFYFQGQPPLVATRRAGERHRFITVEFAPAFLKEHFQKRLADLHPLVRGVVSGEAAGSLVTTPERLVLTLRQLVESLRNCPVFRPAQEMWFRSKALEIAAHLFFQPAGGELLCTRTQRLARERVEKAKQILKEQMQNPPSLEELARMVNCSPFYLSRQFAQAGGMTMQQFLRQIRMERAAELLRTGKCNVTEAAMEVGYNSLSHFSSAFHETFGCCPGLYPLRTEAQQVVLSKR*