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cn_combo_scaffold_5944_7

Organism: CN-SCN_Verrucomicrobia_15x

partial RP 9 / 55 BSCG 9 / 51 ASCG 1 / 38
Location: comp(2398..3039)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDD4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 210.0
  • Bit_score: 153
  • Evalue 1.90e-34
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EEF62080.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.; similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 210.0
  • Bit_score: 153
  • Evalue 2.70e-34
repressor protein C2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 203.0
  • Bit_score: 82
  • Evalue 1.20e-13

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 642
ATGGAAGTGCTGGAAATTCGCGAGCGACTCGGAATGGACCGGGATGCGTTTGCGGCGGCGGTGGGGTTGAGCTCCGAAACCATCAGGCATTACGAACAAGGTCACACCCGAGTTTCCGACCCTGTCCTGATGAGCATGCGGAACCTGGAGAAACTTCGGGCGCACTCGCCACTGGTCGAATTGCGGGACGCGCCTGCGCAATCGGGAGGACTGGTCCCGTTTCCGTTGGTTCCACGACGGCGCGTTCCCGTGGTGAGTTGGGCGCGAGCGGGAGCGATCACAGATCGCGGACTGAATTACGGGGACCTTGCCAACTTTATTGATGAGACAGTCGAGACCGACTCACGCGACCCAAATGCGTTCGGGTTAATTATCGAAGGCGATTCGATGAGCCCGGAGTATTTGCCTGGTGATCGGGTTGTGTTCGCCCCCAATGAGCTGCCGAGGAATGGAGATATTGTGGTGGCGCGACTCGCAGAAGATGGCGAGACCTACTTCAAGGTTTTCAGGCGGAGCGGCGAGGAGGGGCAGATTGTGAAGCTGGAAAGTTTGAACCCGGATTACAAGACGCTCACCTTTCGCTATGATCAATTTCGATTCATTTACCCTGCGGTGGATATGATCCGGCGAATCCGGAAATAA
PROTEIN sequence
Length: 214
MEVLEIRERLGMDRDAFAAAVGLSSETIRHYEQGHTRVSDPVLMSMRNLEKLRAHSPLVELRDAPAQSGGLVPFPLVPRRRVPVVSWARAGAITDRGLNYGDLANFIDETVETDSRDPNAFGLIIEGDSMSPEYLPGDRVVFAPNELPRNGDIVVARLAEDGETYFKVFRRSGEEGQIVKLESLNPDYKTLTFRYDQFRFIYPAVDMIRRIRK*