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ACD53_49_2

Organism: ACD53

near complete RP 45 / 55 MC: 5 BSCG 44 / 51 MC: 3 ASCG 0 / 38
Location: comp(953..1654)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 194.0
  • Bit_score: 181
  • Evalue 2.00e-43
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=55 to=225 evalue=2.7e-50 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.70e-50
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=57 to=145 evalue=1.2e-22 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-22

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Taxonomy

CG_Arma_02 → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 702
ATGGCGGCTTTGGCAGACAGTCTCGAGATCGGGCGTGGTATTGTGGCGTTTGATGAACCATCGCGCCTTGCCCGGGGGGAAGTTGACACAATGATCGGCGACACCGGAAAGGAGACGCTTCCTGAGCACGCTGTCGAGTCGAAGGAACAACGCGCTCCCGCTACCACGTTTGACGAGTTAGTGGAGAAGTACCACCGCCGGATATTCAATGTAGTCTATCGCTACATCGGCGATTATTATGAAGCCTCGGATCTGACACAAGACACGTTCATCCGAGCCTATCAATCCTTCGGGCAGTTCCGGGGGGATTCTTCGGCATACACGTGGCTCTACCGGATAGCGATTAATCTGTCTCACAACCGTCTCAAGCAGTTGAAACGGAAAGCGCGCTCGGAGGTTGAGTCACTGGATGAACCGCTGGATTTTGATGGCAGCGCGCTGGAACGCGAGATCTCCGATTGGAGTCTCTCCCCCGAGCGGTTGGCGGAATGTCAGGAACTACAGAAGTTCATCCAGCATTGCATCCAATCGCTGCCGCCCAACTACCGCGCTGTGATTGTGCTGAGGGACGTGGAAGGACTGTCCTATCAAGAGATTGCCGAATCCACATCCAGTTCAGTCGAGGCCGTCAAATCAAGACTCTTCCGGGCACGTTCACATTTGAAGGGTTTGCTGGAACCATACCTGCAAGCCGAGATATGA
PROTEIN sequence
Length: 234
MAALADSLEIGRGIVAFDEPSRLARGEVDTMIGDTGKETLPEHAVESKEQRAPATTFDELVEKYHRRIFNVVYRYIGDYYEASDLTQDTFIRAYQSFGQFRGDSSAYTWLYRIAINLSHNRLKQLKRKARSEVESLDEPLDFDGSALEREISDWSLSPERLAECQELQKFIQHCIQSLPPNYRAVIVLRDVEGLSYQEIAESTSSSVEAVKSRLFRARSHLKGLLEPYLQAEI*