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cn_combo_scaffold_81_fixed_101

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(105550..106701)

Top 3 Functional Annotations

Value Algorithm Source
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKE1_POLNA similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 376.0
  • Bit_score: 514
  • Evalue 7.70e-143
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 376.0
  • Bit_score: 578
  • Evalue 6.10e-162
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 376.0
  • Bit_score: 514
  • Evalue 2.20e-143

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Taxonomy

R_Burkholderiales_69_20 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGACGCACGCATCGAAGAAGAGCCTGAAGACCCTGGTCGCGGCCGCCGCCGCCCTGCTGATGAGCGCGCCCGTGCTCGCCGACATCAACGTCGGCGTCTCGATCTCGCTCACCGGCGCGGGCTCGGGGCTGGGCATTCCGGAAGGCAACCAGTTCAAGCTCTGGCCACAGACGATCGCCGGCGAGAAGGTCAACCTCATCGTCCTGGATGACGCCACCGACCCGGGCAAGGCCGTCGTCAACGCGCGCCGCTTCGTCACCGAGGACAAGGTCGACATCATCCTCGGCAGCTCGGTCACGCCGACGACGGCGGCCATCGCCCCGGTCGCGGCCGAATCGAAGACCCCGCAGGTGACGCTGGCGCCGGTGGGCGTGCCGCCCGACCAGGAGCGCTGGGTCTTCCGCCTGCCGCAGAGCTTCGCGGTGATGGCCTACCCGCTGGTCGAGCACATGAAGCGCCACGGCGTGAAGACCGTGGGCTTCTTCGGCTACACCGACGCCTACGGCGAGCTGTGGCTGAAGGCCATCACCGCCCAGGCCGAGCAGGCCGGCATGAAGGTGGTCATCTCCGAGCGCTTCGTGCGCAACGACACCAGCGCCACGCCGCAGGCCCTCAAGCTGGGCGCAGCCAACCCCGATGCCATCCTGATCGCCGCCTCGGGCTCGGCCGCGGCGATGCCGCACAAGGCGCTGATCGAGCGCGGCTACAAGGGCAAGATCTACCAGACGCACGGCGCCGCCACCCCTGACCTCGTGCGCATCGGTGGCAAGGACGTCGAGGGCAGCTACCTCGTCTCCGGCCCGGCGGTGATGGCCGAGCAGCTGCCCGACAGCCACCCCTCCAAGGCCGCGGCAACCGAGTTCGTGACGACCTTCGAGAAGGCCTACGGCCCGGGCACGCGCAACCAGTTCGCCGGCCACGCGGCCGACGCCCGCCTCGTGCTCGAGAAGGCGATCCCGGTGGCCTTGAAGAAGGGCAAGCCCGGCACGCCCGAGTTCCGCGCCGCGCTTCGCGATGCGTTCGAGAACATGGGCCGCACCGTCGTCGCCCACGGCGTGATGAACTGGACCGCGAGCGACCACGGCGGCTATACGAACGAAACCGGCGTCATGCTCAAGGTCGAGGGCGGCAAGTTCGTGGTCGAGAAGTAG
PROTEIN sequence
Length: 384
MTHASKKSLKTLVAAAAALLMSAPVLADINVGVSISLTGAGSGLGIPEGNQFKLWPQTIAGEKVNLIVLDDATDPGKAVVNARRFVTEDKVDIILGSSVTPTTAAIAPVAAESKTPQVTLAPVGVPPDQERWVFRLPQSFAVMAYPLVEHMKRHGVKTVGFFGYTDAYGELWLKAITAQAEQAGMKVVISERFVRNDTSATPQALKLGAANPDAILIAASGSAAAMPHKALIERGYKGKIYQTHGAATPDLVRIGGKDVEGSYLVSGPAVMAEQLPDSHPSKAAATEFVTTFEKAYGPGTRNQFAGHAADARLVLEKAIPVALKKGKPGTPEFRAALRDAFENMGRTVVAHGVMNWTASDHGGYTNETGVMLKVEGGKFVVEK*