ggKbase home page
Advanced Search
Search Help

cn_combo_scaffold_7107_4

Organism: CN-SCN_Thiobacillus_1177x

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38
Location: comp(3181..7380)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 999.99
  • Bit_score: 2634
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 999.99
  • Bit_score: 2634
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Thiobacillus thioparus RepID=UPI00037D443B similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 999.99
  • Bit_score: 2707
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4200
ATGAAAGCATTGTTAGATCTTTTCAAGCAGGCCACCCACGAGGAAGAGTTCGACGCCATCAAGATTGGCCTGGCGTCGCCGGAGAAAATCCGCTCCTGGTCGTACGGCGAAGTGAAGAAGCCGGAGACCATCAACTACCGTACCTTCAAACCGGAGCGCGATGGCCTGTTCTGTGCCAAGATCTTCGGTCCGGTGAAGGATTACGAATGTCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTGATCTGCGAAAAATGCGGCGTCGAAGTCACGCTGTCCAAGGTGCGCCGCGAGCGCATGGGCCACATCGAACTGGCAAGCCCGGTCGCCCACATCTGGTTCCTGAAGTCGCTGCCCAGCCGTCTCGGCATGGTGCTCGACATGACACTGCGCGACATCGAACGCGTGCTTTATTTCGAAGGTTTCGTGGTGGTCGAGCCTGGCATGACGCCGCTCAACCGTGGCCAGCTGCTGACCGAGGAAGACTACCTCGCCAAGCTGGAAGAATACGGCGATGAGTTCAAGGCGCTGATGGGTGCGGAAGGTGTGCGCGAATTGCTGCGCTCACTCGACCTGCATACCGAAGTGGAAACGCTGCACGCGGAAATCAGCAAAACCGGTTCCGACACCAAGCTGAAGAAGTTGTCCAAGCGTTTGAAGATTCTTGAGGGTTTCCAGAAGTCCGGCATCAAGCCCGAGTGGATGATTCTCGAAGTGCTGCCGGTGCTGCCGCCTGAGTTGCGTCCGCTGGTGCCGCTGGACGGCGGCCGCTTTGCCACGTCCGATCTGAACGACCTGTATCGCCGTGTCATCAACCGCAACAACCGCCTGAAGCGGCTGCTGGAACTGAAGGCACCGGAAATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCGGTGGATTCCCTGCTCGACAACGGCCGTCGCGGAAAGGCGATGACCGGCGCCAACAAACGCCCGCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGAGCGGTCGTTTCCGTCAGAACCTGCTGGGCAAGCGTGTCGACTACTCGGGTCGTTCCGTCATTGTGGTGGGCCCGACCCTGAAACTGCACCAGTGCGGCCTGCCCAAGAAGATGGCACTCGAACTGTTCAAGCCGTTCATCTTCAACCGCCTCGAAGTGCTGGGGCTGGCGACTACGATCAAGGCCGCCAAGAAGATGGTGGAAGACGAAGAGCCGATCGTATGGGACCTGCTGGAAGAGGTCATCCGCGAGCATCCGGTGATGTTGAACCGCGCACCGACGCTGCACCGCCTGGGCATCCAGGCGTTCGAGCCGGTACTGATCGAAGGCAAGGCGATCCAGCTGCATCCGCTGGTGTGTGCGGCATTCAACGCCGACTTCGACGGCGACCAGATGGCCGTCCACGTGCCGCTGTCGCTGGAGGCGCAGGCCGAAGCGCGCACCCTGATGCTGGCATCGAACAACGTGCTGTCGCCCGCCAACGGCGAGCCCATCATCGTGCCGTCGCAGGACATCGTGCTCGGTCTGTATTACATGACGCGCGAAATGGTCAATGCCAAGGGCGAAGGCATGATGTTTGCCGACGTTACCGAGGCGCGTCGCGCCTACGACAACCGTGAGGCTGCGCTGCATGCTCGCGTTACGGTGCGCATCAAGGAAGTGACGCTTGACGAGAATAAAAACCGTGTCGAGACAATCAAGCGGGTGGAAACCACGCTGGGCCGCGCGCTGCTGTCGGAAATCCTGCCGCCAGGGCTGCCGTTCAGCTTCGTCGACAAGGCGCTGAAGAAGAAGGAAATCTCCAAGCTGATCAATGCCAGCTTCCGCCGTTGCGGTCTGCGTGAAACGGTGATTTTTGCCGACAAGCTGATGTATACCGGCTTCACCTACGCCACCCGTGCGGGGATGTCGATCGCCATCAAGGACATGCTGATCCCGAACGAGAAGGGGCAAATCCTGGGCGCGGCCGAAGCTGAGGTCAAGGAGATCGAATCGCAGTACACCTCGGGTCTGGTGACCCAGGGTGAGCGTTATAACAAAGTGGTCGACATCTGGGGCCGTGCCGGCGACGCCGTGGCCAAGGCCATGATGGCGCAGCTGGGAAGCGAGAAAGTCGCCGATCGCAATGGCAAGGAAGTCACCCAGGAGTCGTTCAACGCGATCTACATGATGGCCGACTCCGGCGCACGGGGTTCCGCAGCGCAGATTCGTCAGCTGGCTGGCATGCGCGGCCTGATGGCGAAGCCGGACGGCTCCATCATCGAGACGCCGATCACGGCGAACTTCCGCGAAGGCCTGAACATGCTTCAGTACTTCATCTCGACCCACGGCGCGCGTAAGGGCCTGGCCGATACTGCGCTGAAGACCGCGAACTCGGGTTACCTGACGCGCCGTCTGGTCGATGTCACGCAGGATCTGGTCGTGGTCGAAGACGATTGCGGCACCAAGAACGGTCTGGTCGTGAAGGCCCTGGTCGAGGGTGGTGAAGTGGTCGAAGCGTTGCGTGAGCGGATTCTCGGTCGCGTGGCCGCCAGCGACATCATCCACCCCGAAACCCAGGAAACCGTGTTCGAAGCCGGCACCCTTCTGGTGGAAGACGTGGTCGACACCATCGAATCGCTGGGCATCGACGAAGTCAAGGTGCGTACGCCGCTGACCTGCGAGACTCGTTATGGCCTCTGTGCCAAATGCTATGGGCGCGATCTGGGCCGCGGCTATCTGGTCAATGCCGGCGAGGCGGTCGGCGTCATCGCCGCGCAGTCGATTGGCGAGCCGGGCACCCAGCTCACCATGCGCACCTTCCACATCGGCGGCGCGGCATCGCGTGCCGCCGCCGCCAGCCAGCTTGAGGCCAAGTCCAACGGCACGGTGCAGTACACCGCCGCGATGCGCTACGTGACCAACGCGCGGAAGGAACTGGTCGCAATCTCGCGCAGCGGTGAAATCATCATTGCCGACGACAGCGGTCGTGAGCGCGAGCGCCACAAGGTGCCATACGGGGCCACGCTGATGGTGACCGACGGCGCCAAGATCAAGGCAGGCGCCGTACTGGCCACCTGGGATCCGCACACCCGTCCGATCATTACCGAATACGCCGGACGCATCCGCTTCGAAAACATCGAAGAGGGCGTGACGGTGGCCAAGCAACTCGACGACGTCACCGGCCTGTCCACGCTGGTGGTGATCGATCCCAAGCGCAAGGCCAGCGGCGCCGGCAAAGGCCTGCGCCCGCAGGTCAAGCTGCTGGACGAAGCCGGCAACGAAATCAAGATTGCGGGAACGGACACGCTGGTCAACATCACCTTCCAGATTGGCTCCATCATCACGGTGAAAGATGGTCAGGACGTGGCGGTGGGCGACGTGCTGGCGCGTATTCCGCAGGAAACCTCGAAGACCCGTGATATTACCGGCGGTCTGCCACGCGTAGCCGAGCTGTTCGAAGCGCGTTCACCGAAAGATGCCGGCGTGTTGGCAGAAGTTACGGGTACGGTCTCCTTCGGCAAGGACACCAAGGGTAAGCAGCGTCTGGTCATCACCGATATGGACGGTGTCGCGCATGAGTACCTGATCACGAAAGAGAAGCACGTGACTGCGCACGACGGCCAGATCGTCCAGAAGGGCGAAATGATCGTCGACGGTCCGGTCGATCCGCATGACATTCTGCGGCTGCAGGGCGTGGAGGCGTTGGCGCGCTATATCACCGACGAGGTGCAGGACGTCTATCGTCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTCATCGTGCGCCAGATGTTGCGCCGCGTCACCGTGGCGGACCCGGGTGCAACCGGACTCATTCCTGGGGAGCAGATCGAGCGTTCGGAAGTGTTGCAGATCAACGACGAGATGGTCGCCGCAGGCAAGGAGCCGGCGACCTACGATCCGATCCTGCTCGGCATCACCAAGGCCTCGCTGTCGACCGATTCCTTCATTTCGGCGGCCTCCTTCCAGGAAACCACGCGTGTGCTGACCGAAGCGGCCATCATGGGCAAGAAGGACGAACTGCGCGGCTTGAAGGAAAACGTGATTGTCGGACGCCTGATCCCGGCGGGCACCGGCCTGGCCTACCACAATACCCGTCGCCGCCAGGCGGCCGGGGAGGACCTGGGGGCGGCTCATCTGATCGAAGGCGGAGAGGCCAGCGCAGACGAGAATCAGGAAGTGGCTTGA
PROTEIN sequence
Length: 1400
MKALLDLFKQATHEEEFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEGFVVVEPGMTPLNRGQLLTEEDYLAKLEEYGDEFKALMGAEGVRELLRSLDLHTEVETLHAEISKTGSDTKLKKLSKRLKILEGFQKSGIKPEWMILEVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKKMALELFKPFIFNRLEVLGLATTIKAAKKMVEDEEPIVWDLLEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQAEARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTREMVNAKGEGMMFADVTEARRAYDNREAALHARVTVRIKEVTLDENKNRVETIKRVETTLGRALLSEILPPGLPFSFVDKALKKKEISKLINASFRRCGLRETVIFADKLMYTGFTYATRAGMSIAIKDMLIPNEKGQILGAAEAEVKEIESQYTSGLVTQGERYNKVVDIWGRAGDAVAKAMMAQLGSEKVADRNGKEVTQESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNMLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTKNGLVVKALVEGGEVVEALRERILGRVAASDIIHPETQETVFEAGTLLVEDVVDTIESLGIDEVKVRTPLTCETRYGLCAKCYGRDLGRGYLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQLEAKSNGTVQYTAAMRYVTNARKELVAISRSGEIIIADDSGRERERHKVPYGATLMVTDGAKIKAGAVLATWDPHTRPIITEYAGRIRFENIEEGVTVAKQLDDVTGLSTLVVIDPKRKASGAGKGLRPQVKLLDEAGNEIKIAGTDTLVNITFQIGSIITVKDGQDVAVGDVLARIPQETSKTRDITGGLPRVAELFEARSPKDAGVLAEVTGTVSFGKDTKGKQRLVITDMDGVAHEYLITKEKHVTAHDGQIVQKGEMIVDGPVDPHDILRLQGVEALARYITDEVQDVYRLQGVKINDKHIEVIVRQMLRRVTVADPGATGLIPGEQIERSEVLQINDEMVAAGKEPATYDPILLGITKASLSTDSFISAASFQETTRVLTEAAIMGKKDELRGLKENVIVGRLIPAGTGLAYHNTRRRQAAGEDLGAAHLIEGGEASADENQEVA*