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cn_combo_scaffold_20181_1

Organism: CN-SCN_Thiobacillus_1177x

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38
Location: 2..187

Top 3 Functional Annotations

Value Algorithm Source
channel protein TolC n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B4EB5 similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 59.0
  • Bit_score: 113
  • Evalue 6.40e-23
type I secretion outer membrane protein TolC similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 61.0
  • Bit_score: 99
  • Evalue 2.70e-19
Type I secretion outer membrane protein, TolC {ECO:0000313|EMBL:AAZ98650.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilacea similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 61.0
  • Bit_score: 99
  • Evalue 1.30e-18

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
GGCGTGCGCACCAACCTCGACGTGCTCAACGCCGAGCAGCAGGTGCTGTCCGCGCGCCGCGACCTCGCCGGCGCGCGCTATGCCTACCTGCTGTCCGGGCTGTCACTCAAGGCCGCCGTCGGCAGCCTCGGCCCGGCCGACCTGGCCGAAATCGACCGCCACCTGAAACCCGCGGCGCCGCAATAA
PROTEIN sequence
Length: 62
GVRTNLDVLNAEQQVLSARRDLAGARYAYLLSGLSLKAAVGSLGPADLAEIDRHLKPAAPQ*