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cn_combo_scaffold_22900_10

Organism: CN-SCN_Thiobacillus_1177x

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38
Location: 7269..7883

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82WG3_NITEU similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 204.0
  • Bit_score: 275
  • Evalue 5.50e-71
cold shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 204.0
  • Bit_score: 273
  • Evalue 4.50e-71
Cold-shock DNA-binding domain {ECO:0000313|EMBL:CAD84628.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomon similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 204.0
  • Bit_score: 273
  • Evalue 2.20e-70

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Taxonomy

Nitrosomonas europaea → Nitrosomonas → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
GTGCGCTATCAGGGAAAAATTACTGACTGGAAGGATGACAAGGGATTCGGATTCATCACGCCAAACGATGGTAACCAACGCGTCTTCGTTCATATCAAGTCATTCTCGAGCCGGCAGCAACGGCCTGTAGGAAATGAAATCGTGACCTACGAACTCCGGCACGATGCCAAGGGTCGGCCGCAAGCCGAACGCATCGCCTTCGTCGGCAAGCGGGGAGCCCCGGCCAGCCCGTCCGGCCAGGACAATGCGCCGCTCATTCTGACTGCGGCGTTTCTTGTCTTTGTCGCGGGATCGGTCTTTGCCGGGAGATTGCCGATTGCAGTCGCAGGACTCTATATGGTTGCCAGCCTTGTCGCATTTATCGCGTATGCGCTCGACAAGTCGGCTGCAAGAAACGACCAGTGGCGCACCCAGGAAAGCACCCTGCATCTTTTTGCTCTGGCAGGTGGCTGGCCGGGTGCTTTGGCTGCACAAAGACTGCTTCGCCACAAGTCAAGGAAACAATCTTTTCAATTCGTGTTCTGGGTCACAGTCGTTCTCAATTGCTGTGCCCTTGCCTGGTTCTACTCAAGCTCAGGCGCCGAGGTGCTGCATTCCATGCTGGGCACGACATGA
PROTEIN sequence
Length: 205
VRYQGKITDWKDDKGFGFITPNDGNQRVFVHIKSFSSRQQRPVGNEIVTYELRHDAKGRPQAERIAFVGKRGAPASPSGQDNAPLILTAAFLVFVAGSVFAGRLPIAVAGLYMVASLVAFIAYALDKSAARNDQWRTQESTLHLFALAGGWPGALAAQRLLRHKSRKQSFQFVFWVTVVLNCCALAWFYSSSGAEVLHSMLGTT*