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cn_combo_scaffold_22887_3

Organism: CN-SCN_Thiobacillus_1177x

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38
Location: 1540..2925

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 476.0
  • Bit_score: 830
  • Evalue 1.40e-237
RNA-splicing ligase RtcB n=1 Tax=Thiobacillus thioparus RepID=UPI000361F847 similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 476.0
  • Bit_score: 827
  • Evalue 4.90e-237
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 476.0
  • Bit_score: 746
  • Evalue 4.10e-213

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGAACCTCGCTCTGTTCAAGCAGGTGTCGGATGTCGAATGGCGCGTCGCGCCGTTCGGGAAAATGCGCGTGCCGGCGGTGGTCTATGCCGACCAGGCGCTGGTGCGCGAAATGGACGAGAAAGTCTTCGCGCAGCTTGTCAACGTCGCCACCCTGCCGGGTATTGTTGATGCCGCCTACGCCATGCCCGACGCGCACTGGGGCTATGGCTTCCCGATCGGCGGCGTGGCGGCGTTCGATGCCGACGCGGGCGGGGTGGTTTCCGCCGGCGGGGTGGGCTTCGACATTTCCTGCGGCGTGCGCCAGCGGCTGGCCGAGCGCCTGTTCGCCCGGATTCCGGCGGGGCTCGGCAGCACCGGCCAATTGCGCCTCGATGCCGGCGAGATGGACGCGATGCTGCGCGGCGGCGCGCGCTGGGCGGTCGAGCGCGGCTACGGCAGCGAGGCCGACCTCGACCGCATCGAGGAGCGCGGCTGCATGGCCGGCGCCGAACCCGGCAACGTGTCCGAGCACGCCAAGCGCCGCCAGCGCGACGAAATCGGCACCCTCGGCTCCGGCAACCATTACCTCGAATTGCAGGAAATCGCCGAAATCTACGACAGCAAGGCGGCCGACCGTTTCCGCCTGCGCCAGGGCGAGGTGGTGGTCAGCATCCACTGCGGCTCGCGCGGGCTGGGGCATCAGATCGGCACCGAATTCCTCAGGCAGATGGTGATCGCCGCGCCGGGCCACGGCATCGAGCTGCCCGACCGCGAACTCGCCTGCGCGCCGATCCTTTCTCCCCTCGGCCAGGCCTACCTCGGCGCCATGCGCGCAGCGGTCAACTGCGCCCTGGCCAATCGCCAGGTCATCACCCAGCTTGCCCGCAAGGTGTTCGCCGACATCGTGCCGGGAACCCATCTCACCCTGATCTACGACGTGTCGCACAACACCTGCAAGCAGGAGACGCACACGGTCGGCGGCCAGACACGCCGCCTCTATGTGCACCGCAAGGGCGCGACGCGCGCCTTTGGCCCCGGCCACCCGGCGCTGCCGGGCGAGCTGCGCGACATCGGCCAGCCGGTGCTGATCGGCGGCAGCATGGGCACCGCGTCCTACATCCTGGCCGGCACCGAAACCGGCGTGACGCGCGCCTTCAGTTCCGCCTGCCATGGCGCCGGGCGCGCCATGAGCCGCCACCAGGCCGCCCGTCAGTGGCACGGCCGGACACTGGTGGACGAACTCGCCGGCCGGGGCATCCTGATCCGCAGTCCGTCGCTGCGCGGTGTGGCGGAAGAGGCTCCGGGCGCCTACAAGGACGTCAGCGCCGTGGTGGAGGCGGCCGATCGCGCCGGGCTGGCGCGCAAGGTGGCGAAGCTGAAGCCGCTGGTGTGCATCAAGGGCTGA
PROTEIN sequence
Length: 462
MNLALFKQVSDVEWRVAPFGKMRVPAVVYADQALVREMDEKVFAQLVNVATLPGIVDAAYAMPDAHWGYGFPIGGVAAFDADAGGVVSAGGVGFDISCGVRQRLAERLFARIPAGLGSTGQLRLDAGEMDAMLRGGARWAVERGYGSEADLDRIEERGCMAGAEPGNVSEHAKRRQRDEIGTLGSGNHYLELQEIAEIYDSKAADRFRLRQGEVVVSIHCGSRGLGHQIGTEFLRQMVIAAPGHGIELPDRELACAPILSPLGQAYLGAMRAAVNCALANRQVITQLARKVFADIVPGTHLTLIYDVSHNTCKQETHTVGGQTRRLYVHRKGATRAFGPGHPALPGELRDIGQPVLIGGSMGTASYILAGTETGVTRAFSSACHGAGRAMSRHQAARQWHGRTLVDELAGRGILIRSPSLRGVAEEAPGAYKDVSAVVEAADRAGLARKVAKLKPLVCIKG*