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cn_combo_scaffold_24690_3

Organism: CN-SCN_Thiobacillus_1177x

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38
Location: comp(2021..2515)

Top 3 Functional Annotations

Value Algorithm Source
channel protein TolC n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B4EB5 similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 164.0
  • Bit_score: 304
  • Evalue 6.80e-80
type I secretion outer membrane protein TolC; K12340 outer membrane channel protein Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 161.0
  • Bit_score: 264
  • Evalue 8.30e-68
type I secretion outer membrane protein TolC similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 163.0
  • Bit_score: 251
  • Evalue 1.90e-64

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
GTGGCCGGCTACACCGTCAACAACAAGCAGAATTTCGGCACCACGCAGGTGGATACCCGCATCGCCAGCATCGGGCTGGAACTCAATCTGCCGATCTATCAGGGCGGGCTGACCAGTTCGCGCGTGCGCGAAGCCGTCGCCAACCAGGAAAAGGCGCGCCAGGATCTGGAAAACGCCACCCGCGAGGCCAGCCTGCAAGCCCGCCAGGCCTGGCTCAACGTCAGCAGCGGCGTCGCCCGCGTGCAGGCGCTGGAACAGGCGCTCACCTCCAGCAAAGCGCAGCTCGAATCCACCAAGCTCGGCCTGCAGGTCGGCGTGCGCACCAACCTCGACGTGCTCAACGCCGAGCAGCAGGTGCTGTCGGCGCGCCGCGACCTCGCCGGCGCGCGCTACGCCTACCTGTTGTCCGGGCTGTCGCTCAAGGCCGCCGCCGGCAGCCTTGACCCGGCTGACCTGGCCGAAATCGACCGGCACCTGAAACCTGCAGGGGAGTAA
PROTEIN sequence
Length: 165
VAGYTVNNKQNFGTTQVDTRIASIGLELNLPIYQGGLTSSRVREAVANQEKARQDLENATREASLQARQAWLNVSSGVARVQALEQALTSSKAQLESTKLGLQVGVRTNLDVLNAEQQVLSARRDLAGARYAYLLSGLSLKAAAGSLDPADLAEIDRHLKPAGE*