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cn_combo_scaffold_33248_9

Organism: CN-SCN_Thiobacillus_1177x

partial RP 13 / 55 MC: 2 BSCG 12 / 51 MC: 2 ASCG 4 / 38
Location: comp(5372..6025)

Top 3 Functional Annotations

Value Algorithm Source
pchF; p-cresol methylhydroxylase subunit (EC:1.17.99.1) similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 204.0
  • Bit_score: 383
  • Evalue 3.30e-104
4-cresol dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003726AFE similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 217.0
  • Bit_score: 420
  • Evalue 8.60e-115
Glycolate oxidase subunit GlcD {ECO:0000313|EMBL:CEA06150.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 204.0
  • Bit_score: 384
  • Evalue 1.20e-103

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Taxonomy

Pseudomonas sp. 12M76_air → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGGGCGCCTGGAACCTCTACGCCGCGCTCTACGGCACCCAGGAGCAGATCGATGTGAACTGGAAGATCGTCACCGACGCATTCAGGAAGCACGGCAAGGGCCGCATCGTCACCCAGGAAGAGGCCGGCGACAAGCAGCCCTTCAAGTACCGCGCCGAACTGATGTCCGGCGTGCCCAACCTGCAGGAGTTCGGCCTGTACAACTGGCGTGGCGGCGGCGGCTCGATGTGGTTCGCGCCGGTCAGCGAGGCCCGCGGCAGCGAGTGCGCAAAGCAGGCGCTGCTGGCCAAGCGCATCCTGCACAAGTACGGTCTGGACTATGTGGCCGAATTCATCGTCGGCCCGCGGGACATGCACCATGTGATCGACGTCCTCTATGACCGCACCAGCGACGAGGAGATCAAGCGGGCCGATGCCTGCTTCAACGAGCTGCTGGACGAGTTCGAGAAGGAAGGCTACGCCGTCTACCGCGTCAATACCCGCTTCCAGGAGCGGGTGGCACGCAGCTACGGCCCGGTAAAACGGTACGTGGAACACGCCATCAAGCGTGCCCTGGACCCGAACAACATCCTCGCGCCCGGCCGTTCCGGCATCGATCTGGACGCCTACGAGACGAGGCGGAGAGCCAAAATCGCATCGAGCGACGAATCGTGA
PROTEIN sequence
Length: 218
MGAWNLYAALYGTQEQIDVNWKIVTDAFRKHGKGRIVTQEEAGDKQPFKYRAELMSGVPNLQEFGLYNWRGGGGSMWFAPVSEARGSECAKQALLAKRILHKYGLDYVAEFIVGPRDMHHVIDVLYDRTSDEEIKRADACFNELLDEFEKEGYAVYRVNTRFQERVARSYGPVKRYVEHAIKRALDPNNILAPGRSGIDLDAYETRRRAKIASSDES*