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cn_combo_scaffold_3245_1

Organism: CN-SCN_Thiobacillus_729x

partial RP 25 / 55 BSCG 24 / 51 ASCG 3 / 38 MC: 1
Location: 2..667

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z35_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 233.0
  • Bit_score: 183
  • Evalue 2.30e-43
lipopolysaccharide biosynthesis similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 233.0
  • Bit_score: 183
  • Evalue 6.60e-44
Lipopolysaccharide biosynthesis {ECO:0000313|EMBL:ABD68968.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax fer similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 233.0
  • Bit_score: 183
  • Evalue 3.30e-43

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Taxonomy

Rhodoferax ferrireducens → Rhodoferax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
GGCACCCCCCAGCTGGCCGCCGCGATGGCGAACGCCTATGTCGAAGAGCTCTCCTCGCTGACCGGCCGCCTGGCGGTGACCGAAGCGCAGAAGCGCCGACGATTTCTCGAAAAAGAGTTGGCCAAGGCCAAAGAGAATCTGGTCAAGGCCGAAATCGCCCTGGGCGGCGCCGGCGTCAGCGAAGACACGCTGAAGTTCAACCCCGCAGTCATGGGCCAAGGCCTCGCCACCCTCAAGGCGCAAATCATGGCCAAGGAACTGCAGCTATCCAGCATGCGCGGTGTTCTTACCGAGAACAGCCCGAATTTTCGCCAGGCCCAGCAAGAATTGGCGGCGCTGCGCGCGCAACTGGGCAAGTTCCAAAATACCCGCCCCAACGGAGATAATGCCGAATACATCAGCCGCTACCGCGACTTCAAATACAACGAAGTGCAGGTGGTGGATGTGGCGGTGCCGCCGGAGCGCAAGTCCAATACCCCAAAATCGAAGACTGCCACTCTGGCTGCGCTGGCCGCCGGCTTTGTGTTGCTGGTATTCGTGTTTGTTCGCCGTGCCCTGAAAAACGCCAACCAGAACCCTGAAAATACGGCCAAGTTCGCGGCCATCCGTGCCGGCTTTTTGCGGGTGCTGATGCCCTGGCGCCGAAGTGCCAAGGCAGGCCGGTAA
PROTEIN sequence
Length: 222
GTPQLAAAMANAYVEELSSLTGRLAVTEAQKRRRFLEKELAKAKENLVKAEIALGGAGVSEDTLKFNPAVMGQGLATLKAQIMAKELQLSSMRGVLTENSPNFRQAQQELAALRAQLGKFQNTRPNGDNAEYISRYRDFKYNEVQVVDVAVPPERKSNTPKSKTATLAALAAGFVLLVFVFVRRALKNANQNPENTAKFAAIRAGFLRVLMPWRRSAKAGR*