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cn_combo_scaffold_7534_8

Organism: CN-SCN_Thiobacillus_729x

partial RP 25 / 55 BSCG 24 / 51 ASCG 3 / 38 MC: 1
Location: 9543..10493

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Thiobacillus thioparus RepID=UPI0003782783 similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 316.0
  • Bit_score: 619
  • Evalue 1.80e-174
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 316.0
  • Bit_score: 611
  • Evalue 5.30e-172
RNA polymerase sigma factor RpoS similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 316.0
  • Bit_score: 579
  • Evalue 5.90e-163

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGAGCCGCGAACCCAGCGACGAATCCGATGAACTGACCCCCGAGCAATCTGAAGCCGACATGGAGCCGCAGACCGCCGCGGATACCAATGAGGAATTGGCATCCGCCATCCTCGATGAACCGCAGGTCGACGTCACCCAGCTGTACCTCAACGAAATCGGGCTGGCGCCGCTACTGACCGCCGCGGAAGAAGTCGCCCTTGCACGGCGCACCGTGCAAGGGGATTTCGAGGCGCGGCAGACCATGATCGAACGCAACCTGCGCCTGGTGGTGAACATTGCCAAGCATTATTCCAACCGCGGGCTGACGCTGCTCGACCTGGTGGAAGAAGGCAATCTCGGCCTCATCCATGCGCTGGAGAAATTCGACCCCGAGCGCGGCTTCCGCTTCTCGACTTATGCCACCTGGTGGATCCGCCAGAACATCGAGCGCGCGATCATGAACCAGTCGCGCACCATTCGCCTGCCGGTGCATATCATCAAGGAACTCAACATCTACCTGCGGGCGAAGCGCCATCTGGAAACACATGGCGTCACCGATGCCAGCGCAGACGATATTGCCGCGTTGACCGGGCACCCGGTCGAGGATGTCCGCCGCATCATGCAGCTGAACGAACGGGTCGCCTCGCTCGATGCGCCGCTCGACGTTGATCCCACGCTGTCTCTGGGCGAGGCGATTGCCGACGACAATGCACACCTGCCGGACGAGATGCTGCAACTCGAGGAAATCGAGCACCACGTCCACGAATGGCTGACCCAACTCAACGACAAGCAGCGCTGGGTGATTGAACGCCGTTTCGGGCTGAACAACTGCGAGGCCTGCACGCTGGAAGACCTGGCGCTCGAATTGCAGGTCACCCGCGAGCGCGTGCGGCAGATCCAGATGGAATCCCTGCGCGTGCTGCGGCAGCTGCTGCGGCGACGCGGCGTATCCAAGGACGAACTGTTCTGA
PROTEIN sequence
Length: 317
MSREPSDESDELTPEQSEADMEPQTAADTNEELASAILDEPQVDVTQLYLNEIGLAPLLTAAEEVALARRTVQGDFEARQTMIERNLRLVVNIAKHYSNRGLTLLDLVEEGNLGLIHALEKFDPERGFRFSTYATWWIRQNIERAIMNQSRTIRLPVHIIKELNIYLRAKRHLETHGVTDASADDIAALTGHPVEDVRRIMQLNERVASLDAPLDVDPTLSLGEAIADDNAHLPDEMLQLEEIEHHVHEWLTQLNDKQRWVIERRFGLNNCEACTLEDLALELQVTRERVRQIQMESLRVLRQLLRRRGVSKDELF*