ggKbase home page

cn_combo_scaffold_11550_7

Organism: CN-SCN_Thiobacillus_729x

partial RP 25 / 55 BSCG 24 / 51 ASCG 3 / 38 MC: 1
Location: comp(2803..3255)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Thiobacillus thioparus RepID=UPI0003673018 similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 118.0
  • Bit_score: 228
  • Evalue 5.60e-57
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 118.0
  • Bit_score: 225
  • Evalue 3.90e-56
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 118.0
  • Bit_score: 212
  • Evalue 6.90e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGTCACGTGTAGCCAATAATCCTATTACGTTGCCGAAGGGTGTCGAAGTGACCTTAGGTGGCGCCATCTCCGTCAAGGGCCCGCTGGGCAGTATGAGTCGTGCAATGTCGTCCGATGTGACGGTTGCGCTCAATGAAGGTGTACTGACCTTTGCGCCTATCGGTGCAAGCATTCAGGCGAACGCCATGGCGGGGACCCTGCGTGCGTTGGTTAACAACATGGTGCAAGGTGTTTCCAAGGGGTTCGAGAAGAAGCTGACGCTGGTTGGGGTCGGTTATCGTGCTCAGGCCCAGGGCGATGCACTCAATTTGACGCTCGGTTTCTCGCATCCGGTCGTGCACAAGATGCCGACGTGCGCGCATACCGTCCGCCGGAGCCCTACAAGGGCAAGGGCGTTCGCTATAGCGACGAAGTGGTCATCAAGAAAGAGACCAAGAAGAAGTAAGGCTTAA
PROTEIN sequence
Length: 151
MSRVANNPITLPKGVEVTLGGAISVKGPLGSMSRAMSSDVTVALNEGVLTFAPIGASIQANAMAGTLRALVNNMVQGVSKGFEKKLTLVGVGYRAQAQGDALNLTLGFSHPVVHKMPTCAHTVRRSPTRARAFAIATKWSSRKRPRRSKA*