ggKbase home page

cn_combo_scaffold_14599_2

Organism: CN-SCN_Thiobacillus_729x

partial RP 25 / 55 BSCG 24 / 51 ASCG 3 / 38 MC: 1
Location: comp(1260..1970)

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis sigma factor n=1 Tax=Thiobacillus thioparus RepID=UPI000376BE13 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 236.0
  • Bit_score: 466
  • Evalue 1.50e-128
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 236.0
  • Bit_score: 456
  • Evalue 4.30e-126
  • rbh
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 236.0
  • Bit_score: 456
  • Evalue 2.10e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGTAGGTAAACCATCGTCGCAAGACGAGCAGATCACCAAGTATGCGCCGCTGGTCAAGCGCATCGCATATCACATGATGGCGCGCCTGCCCGCCAGCGTCGAAGTCGACGACCTCATCCAGGTCGGCCTGATCGGCCTGATGGATGCGGTAGGGCGTTTCGACGGCACCCAGGGCGCGCAGTTCGAATCCTACGCCACCCAGCGCATCCGTGGCGCCATGCTCGACGAGTTGCGCGAGGCGGACTGGCTGCCGCGTCATGTGCGGCAGAAGTCCCGGCAGATCGAAGCCGCCATCCACCGACTGGAGCAGCGCAACGGCAAGTCGCCGTCCGAGCAGGAAATCTCCGCCGAGCTGGGCATACCGATCGATCAGTATCAATCCATGCTGGGCGACGTGAAGTGTTCCCAACTGCTCTACTACGAAGACTTCTCGGATGAGGATAGCGCCAGCTTCCTGGAGCGCTATCTGGTCGACGGCAGCAATGATCCGCTGGCCGTGCTGGAGGATGAAGGTTTCCGCGACAGCCTGATTGCCGCGATCCACCACCTGCCGGAACGCGAGCGCAGCATGATGGGCATGTACTACGAACAAGACATGAATCTGAAGGAAATCGGCGCGGTGCTCGGTGTGTCCGAGTCGCGCGTGTGCCAGCTGCATTCGCAGGCGGTCGCGCGTCTGCGTGCCCAACTCAAGATATGGAAAGACTGA
PROTEIN sequence
Length: 237
MVGKPSSQDEQITKYAPLVKRIAYHMMARLPASVEVDDLIQVGLIGLMDAVGRFDGTQGAQFESYATQRIRGAMLDELREADWLPRHVRQKSRQIEAAIHRLEQRNGKSPSEQEISAELGIPIDQYQSMLGDVKCSQLLYYEDFSDEDSASFLERYLVDGSNDPLAVLEDEGFRDSLIAAIHHLPERERSMMGMYYEQDMNLKEIGAVLGVSESRVCQLHSQAVARLRAQLKIWKD*