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cn_combo_scaffold_23309_11

Organism: CN-SCN_Thiobacillus_729x

partial RP 25 / 55 BSCG 24 / 51 ASCG 3 / 38 MC: 1
Location: comp(7550..7786)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Thiobacillus RepID=UPI00037A4DDE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 78.0
  • Bit_score: 154
  • Evalue 5.40e-35
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 78.0
  • Bit_score: 152
  • Evalue 5.80e-35
RNA-binding protein Hfq; K03666 host factor-I protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 78.0
  • Bit_score: 152
  • Evalue 2.90e-34

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
AAAGAATACAACCACCTGCAAGACGTTTTCCTCAACACCCTGCGCAAGGAACGCATCCCGGTTTCAGTGTTTCTCGTGAACGGGATCAAGCTCATGGGGCGAATCGAATCGTTCGACCAGTTTGTGGTGCTGCTGAAAGGTCAGGACCAGGCTGCCCAGATGATCTTCAAGCACGCCATCTCGACCATTTCGCCTTCGCGCGAAGTGGTCCTGCCGCAGCGCGACGCCGAGGCCTGA
PROTEIN sequence
Length: 79
KEYNHLQDVFLNTLRKERIPVSVFLVNGIKLMGRIESFDQFVVLLKGQDQAAQMIFKHAISTISPSREVVLPQRDAEA*