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cn_combo_scaffold_23644_1

Organism: CN-SCN_Thiobacillus_729x

partial RP 25 / 55 BSCG 24 / 51 ASCG 3 / 38 MC: 1
Location: comp(1..246)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003746C67 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 82.0
  • Bit_score: 167
  • Evalue 4.90e-39
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 82.0
  • Bit_score: 114
  • Evalue 5.30e-23
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 69.0
  • Bit_score: 103
  • Evalue 3.20e-20

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Taxonomy

R_Gammaproteobacteria_61_13 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGCAGCAGCCTGTGCCGCAAGCACCCATCAAGGATTTGACGGACGCCGAATTGGCGGGACGCATCGCATCGGGGGACAGGCTTGCGCTTCAGTGCCTGATGCGCCGGTACAACCAGACGCTCTACCGTACCGCACGCAGCATCCTCAAAGACGATGCCGAAGCCGAGGATGCCGTTCAGGAGGCCTATGTGCTGGCCTATCACGCAATGGATCATTTCCGCGGCGATGCGAAATTGTCGACCTGG
PROTEIN sequence
Length: 82
MQQPVPQAPIKDLTDAELAGRIASGDRLALQCLMRRYNQTLYRTARSILKDDAEAEDAVQEAYVLAYHAMDHFRGDAKLSTW