ggKbase home page

SR-VP_26_10_2020_1_100CM_scaffold_4711106_8

Organism: SR-VP_26_10_2020_1_100CM_Methanoperedens_43_19

near complete RP 29 / 55 MC: 2 BSCG 19 / 51 MC: 1 ASCG 36 / 38 MC: 4
Location: comp(8786..10528)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair ATPase (Rad50-like) similarity KEGG
DB: KEGG
  • Identity: 29.6
  • Coverage: 614.0
  • Bit_score: 249
  • Evalue 1.50e-63
Putative DNA repair ATPase (Rad50-like) n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9S4_METCZ similarity UNIREF
DB: UNIREF100
  • Identity: 29.6
  • Coverage: 614.0
  • Bit_score: 249
  • Evalue 5.30e-63
ATPase involved in DNA repair {ECO:0000313|EMBL:KCZ71924.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 580.0
  • Bit_score: 662
  • Evalue 3.70e-187

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1743
CAGGAGCTAAAAGATATTGAAGACCAGTCCGTTTCAATATCAAATGAACTAAAGGAGCTCAACAATCCAAAAAAACAGCTTGAAGACCAGAAGGTCCTCATCGCATCGAAGAGAAAAGAGCTAAATATCTATAAAAATGCTTATGAGGAACTTCTGGATTGCCGGAAAAAACTCAAAGAACTTGAATTGTATTATCCATTACTTGGTTATTGCAATCTTCTGGGAATTGAGGATGAACAAAAATCCATACGTCTCAGGTTGAAATCCGATGAAAAGGAAATTGAAAAAATAGAAAAAAATGTAGCAGAGTTTGAAACAACAGATGCCCTGATCTCATCCAAGAAACAAGACCTTGAGATATTATCCGGCACTTCCCTTGCTCTGTCAAAATGCCAGGAAAAGCTAATGCAGCTTGGTTCAAAGTTCAATTTGACCATAGAGATCCACACGATCGAAACTAACCTTGAAAATATAATTAATAAAATAAAATCTATTGAGAAGTCTTTAAAGGATCTGAATGATCCTGAAGGACAGATAACCACACTTGCATCATTGATATCATCAAAGGAAAAAGATTTAGATGCCTTAAAAGGTGTACCTGCCAGGATCTCTGGCATTCTTGAGCGGCTCGAGTTGCTCAATAAACGTTTCAATCTTAAAAAAAAACTGGATGGAATTCCTGAAGAGCTGGAAATTGTTGATGAATTGATCGATAACAAGAATAGAGAACTAAAAGCGCTCAACTCACCTGAAAAAGAATTTGAGAAATTAAACAGCATGATCGAGAAAAATCTCAAGGAGTTGGAAAAACTTGAAAATATTCCGGATATACTCGAATCCTGCAGGACTGAACGTGAAACCATGATTAAAAAGTCCGATCAGTTTGAAGGGCTGGATGAAAAAATAATCGCAGTCCAAGAATCGATTGCACGACTTGAACCGGGACATAATAGATATATGCAGCATCTTCCTCTCTCTCTTAAATTGAGGGAATATGCAGAAGATTGCGAAAAATTTGAAGAAAGTTTAAAGGCCATCAATATTTCGCTATCCGAATACACGCGCAGGCAGGCAGCATTGCTGTCGGAATTCAGCGAAATTGAACTGAATGGAACGGTCCAGCAGCTTGAAGACCTGGGGAAAAACGCAAGCACGGTAAATGAGTCTATAAAAGGAAAAAGAAAGAATCTTGAAAGGCTTTCCCGTGATATCGAGTCCATGGAATCGGATCTCCTTAAAATAAAAGAGATCGAGAAAAAACATGAAAATGAAAAAGAATTTCTCTCCTTTTCGAATTTTATCCGCGATACTATAAAGAACTCATCCGAGTATATTGTCAATGAATTCATCGGGGAAATAAGCCAGGAAGCCAATAATATCTTTTGTGAAATAATGGGTGATTATAATTCAAACCTTAAATGGGCTAATGATTACGATATTGTGATAGAATCCAGCGGTGAGGAAAAATCATTCAGGCAATTAAGCGGAGGCGAACGAATGGGCGCAGCGCTTTCAGTTCGGCTTGCACTCCTGAAAGCCCTTTCTAATTGCGATTTTGTATTCCTTGATGAGCCCACCCAAAATATGGATGAGATAAGGCGTGAAAAACTTTCAGAAGAGATAATGAAAATACGAGGATTCAGGCAGGTATTTGTAATATCCCATGATGATACTTTTAACGAAAAATATGGCCATGTGGTTAAGATAGAAAAGATAAATGGTGAAAGCAGGGTCGTAGAATGA
PROTEIN sequence
Length: 581
QELKDIEDQSVSISNELKELNNPKKQLEDQKVLIASKRKELNIYKNAYEELLDCRKKLKELELYYPLLGYCNLLGIEDEQKSIRLRLKSDEKEIEKIEKNVAEFETTDALISSKKQDLEILSGTSLALSKCQEKLMQLGSKFNLTIEIHTIETNLENIINKIKSIEKSLKDLNDPEGQITTLASLISSKEKDLDALKGVPARISGILERLELLNKRFNLKKKLDGIPEELEIVDELIDNKNRELKALNSPEKEFEKLNSMIEKNLKELEKLENIPDILESCRTERETMIKKSDQFEGLDEKIIAVQESIARLEPGHNRYMQHLPLSLKLREYAEDCEKFEESLKAINISLSEYTRRQAALLSEFSEIELNGTVQQLEDLGKNASTVNESIKGKRKNLERLSRDIESMESDLLKIKEIEKKHENEKEFLSFSNFIRDTIKNSSEYIVNEFIGEISQEANNIFCEIMGDYNSNLKWANDYDIVIESSGEEKSFRQLSGGERMGAALSVRLALLKALSNCDFVFLDEPTQNMDEIRREKLSEEIMKIRGFRQVFVISHDDTFNEKYGHVVKIEKINGESRVVE*