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cn_combo_scaffold_1100_21

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 17794..19053

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=323848 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 419.0
  • Bit_score: 818
  • Evalue 5.00e-234
Transcription termination factor Rho n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y792_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 419.0
  • Bit_score: 818
  • Evalue 3.60e-234
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 419.0
  • Bit_score: 818
  • Evalue 1.00e-234
  • rbh

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGCATCTATCCGACCTCAAAAACTTCCATGTTACCGAACTGGTGGAGATGGCAATTGCCAATGAAATTGACGGCGCCAACCGGCTACGGAAACAGGATCTGATTTTCGCGTTATTGAAGAATCAGGCACGGAAAGGCGAAAGCATTTTCGGCGAAGGCACTCTGGAAGTGCTGCAGGATGGTTTCGGCTTCTTGCGTTCTCCCGACACTTCATATCTCGCCGGCCCGGATGACATTTATGTCTCACCCAGCCAGATACGGCGCTTCAACCTTCATACGGGAGATTCGATAGAGGGTGAAATAAGGACGCCCAAGGATGGGGAGCGTTATTTTGCGCTGGTCAAGGTCGATAAGGTCAATGGAGAACCCCCTGAAAACTCCAAGCACAAAATACTGTTTGAAAATCTCACCCCGCTCTTCCCCACCGAGCGACTGCAGCTCGAACGCGAGATCAAAGCCGAAGAAAACGTTACCAGCCGCATCATCGATCTGATTGCACCCATCGGCAAAGGACAGCGAGGTCTCCTGGTAGCCAGCCCCAAATCCGGCAAGACCGTCATGCTTCAGCACATCGCTCACGCCATTGCCGCCAATTACCCGGATGTGATGCTGATGGTGCTGCTGATAGATGAGCGGCCCGAAGAAGTGACCGAGATGATCCGGTCGGTAAGAGGTGAAGTAATTTCTTCCACTTTCGATGAGCCGGCCGTGCGTCATGTGCAAGTCGCGGACATGGTCATCGAAAAAGCCAAGCGGCTGGTGGAACACAAGAAGGATGTGGTAATTCTGCTGGATTCGATCACCCGTCTCGCGCGGGCCTATAACACAGTGGTACCCGCTTCCGGAAAAGTGCTGACGGGCGGTGTGGATGCCAACGCGCTGCAGCGGCCGAAGCGGTTTTTTGGCGCGGCGCGCAATATCGAGGAGGGTGGCTCTCTCACCATTATTGCCACCGCTTTGGTCGACACCGGCTCGCGCATGGACGACGTGATTTATGAGGAATTCAAGGGTACCGGCAACATGGAAATCCATCTTGACCGACGCATGGCGGAAAAACGCATTTATCCCGCCATCAACGTCAATCGTTCCGGCACCCGCCGCGAAGAACTCCTGATCAAGCCCGATGTGTTGCAGAAAATCTGGGTGCTGCGCAAACTGCTCTACCCGATGGATGACATGGAAGCAATGGAGTTTCTGCTCGACAAGATCAAGGCGACGAAGAACAACGCGGACTTCTTCGATTCAATGCGGCGAGTCTAA
PROTEIN sequence
Length: 420
MHLSDLKNFHVTELVEMAIANEIDGANRLRKQDLIFALLKNQARKGESIFGEGTLEVLQDGFGFLRSPDTSYLAGPDDIYVSPSQIRRFNLHTGDSIEGEIRTPKDGERYFALVKVDKVNGEPPENSKHKILFENLTPLFPTERLQLEREIKAEENVTSRIIDLIAPIGKGQRGLLVASPKSGKTVMLQHIAHAIAANYPDVMLMVLLIDERPEEVTEMIRSVRGEVISSTFDEPAVRHVQVADMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALVDTGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRIYPAINVNRSGTRREELLIKPDVLQKIWVLRKLLYPMDDMEAMEFLLDKIKATKNNADFFDSMRRV*