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cn_combo_scaffold_1539_5

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 7632..8459

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 275.0
  • Bit_score: 514
  • Evalue 2.00e-143
  • rbh
Shikimate dehydrogenase (NADP(+)) {ECO:0000255|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000255|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000255|HAMAP-Rule:MF_00222};; TaxID=323848 species="Bacteria; Prote similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 275.0
  • Bit_score: 514
  • Evalue 1.00e-142
Shikimate dehydrogenase n=2 Tax=Nitrosospira multiformis RepID=AROE_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 275.0
  • Bit_score: 514
  • Evalue 7.20e-143

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAGTGATCTTTATGCCGTCATCGGTAATCCTGTTGCTCATAGCAAGTCGCCCCTGATTCATGTGGGATTTGCACGTCAAAGCGAACAGGATATTCGGTATGAAGCGATACTTGCGCCATTGGATGGGTTCGTGGAAACGGTAGTTGCCTTCAGGCAGCGGGGCGGCAAAGGGGCGAACGTAACCGTGCCATTCAAGCTGGAAGCCCACACGCTATCAAGCTGCCTCACGGAGCGGGCAAAGGCTGCGGGGGCAGTGAACACGCTTGTATTCGAGGCAGATGACATCCTGGGAGATAACACGGATGGCGCGGGGCTGGTACGGGACATCGCCGTCAATCTCGGCTATGCGCTCGATGACCGGCGCGTCTTGCTCATGGGCGCGGGCGGAGCAGCCCGCGGGGTAATCAGGCCCTTGCTCGATCATGAGCCTGCCGCGCTGGTGATTGCCAATCGCACCCGCCAAAAGGCAGATGACCTGCAGCGGTTGTTTGCATCCTCGGGGAACGTTATTTCCGCAGCGTACGAGGATCTTCGCGGGCAGGAATTCGACCTTGTCATCAATGCCACCTCCGCCAGCCTGCAGGGCGACCTACCGCCTCTGCCAGAAGGTATTTTCGCCGGCGCTTCGTTGGCCTACGATATGATGTACGGCAAGGGGCTTACTCCTTTTCTGCAATTCGCGCAGCAGCAGGGGGCAGCGCGGCTGGCCGATGGAATCGGCATGCTGGTGGAGCAGGCGGCCGAATCCTTCTTTCTCTGGCGCGGGATACGGCCGAAAACGGAACCGGTCATTGAAATGTTAAGGTCAAGCCTCGGCAGTCCGTAG
PROTEIN sequence
Length: 276
MSDLYAVIGNPVAHSKSPLIHVGFARQSEQDIRYEAILAPLDGFVETVVAFRQRGGKGANVTVPFKLEAHTLSSCLTERAKAAGAVNTLVFEADDILGDNTDGAGLVRDIAVNLGYALDDRRVLLMGAGGAARGVIRPLLDHEPAALVIANRTRQKADDLQRLFASSGNVISAAYEDLRGQEFDLVINATSASLQGDLPPLPEGIFAGASLAYDMMYGKGLTPFLQFAQQQGAARLADGIGMLVEQAAESFFLWRGIRPKTEPVIEMLRSSLGSP*