ggKbase home page

cn_combo_scaffold_1539_23

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: comp(27309..27743)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RL13_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 144.0
  • Bit_score: 298
  • Evalue 3.30e-78
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 144.0
  • Bit_score: 297
  • Evalue 2.70e-78
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospi similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 144.0
  • Bit_score: 297
  • Evalue 1.30e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
GTGAAAACCTTTTCAGCCAAACCACATGAAGTGAATCGGGAATGGTTCGTGATTGATGCGGCCGGCAAGGTACTTGGACGCCTCGCTGCCGAGATTGCCCATCGTCTTCGCGGCAAGCATAAGCCTATCTATACGCCGCATGTGGATACCGGTGATTTCATTGTCGTGATCAACGTGGACAAGATGCGCGTTACCGGCAACAAGGCTGAAAGCAAGATGTACTATCGCCATAGCGGTTACCCCGGTGGTATATACGAAACCAGTTTCGCGAAAATGCACGCACGCTTTCCCGGCAGGCCGCTGGAAAAAGCAGTAAAAGGCATGCTGCCGAAAGGTCCTCTCGGCTATGCAATGTTAAAGAAACTCAAGATATATGCCGGTGCAGCACATCCACACGCCGCACAACAGCCGCGGCAACTTGAAGTCAGGGCTTGA
PROTEIN sequence
Length: 145
VKTFSAKPHEVNREWFVIDAAGKVLGRLAAEIAHRLRGKHKPIYTPHVDTGDFIVVINVDKMRVTGNKAESKMYYRHSGYPGGIYETSFAKMHARFPGRPLEKAVKGMLPKGPLGYAMLKKLKIYAGAAHPHAAQQPRQLEVRA*