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cn_combo_scaffold_2184_9

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 9694..13161

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=323848 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 999.99
  • Bit_score: 2173
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBC5_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 999.99
  • Bit_score: 2173
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 999.99
  • Bit_score: 2173
  • Evalue 0.0

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3468
ATGGCACTGAATCTGACCATTCCCCCATCCGGATCGACTATTCGCTACGATCACTTTGACGGATCTTCCGACTCGCTTGCCCTCGCCCAGCTGGCACTGGAGGCGAGAGCAAAGCCCATTGCCATCATTACGGCGAGCGCTTTGGCCGCTCAACGGCTGCTGGAGGAAATACCTTTTTTTGCACCGGAGCTGAGAACCCGGCTGCTGCCGGATTGGGAAACGTTGCCCTACGATACTTTTTCGCCGCATCAGGATCTCGTTTCCGAAAGACTGGCTACGCTCTACCAGCTCATGAACGGCGCCTGCGACATATTGATCGTTCCCGTCACCACGGCCCTGTACCGCATGCCACCGCCCGAGTACCTTGCGGCACATACTTTTTTTCTCGCTCGCGGCGAAACCCTTGACCTGAATGCATTGCGCGGCCAGATGACCTTGGCCGGCTACAGCCACGTGACCCAGGTACTTTCACCTGGGGAATACAGCGTACGCGGTGGGCTGATCGACCTGTTTCCGATGGGAAGCCCGCTGCCTTACCGGATCGACCTGCTCGATAACGAAATCGAAACCATCCGTACATTTGATGTCGATACCCAGAGAAGCGTTTATCCCGTCACCGAGATACGATTACTTCCGGCACGTGAATTTCCTCTCGACGAGGAAGGCCGAACCCGCTTTCGAGGCAGATTCCGTGAAAAATTCGAGGGAGATCCTTCCAGGAGCCTGATTTACAAGGACATCAGCAAGGGCGGCAGTCCCGCTGGCATCGAGTACTACCTGCCTCTTTTTTTCGAGCACACTGCTACACTGTTCGATTACCTACCGCAAACGGCGCTGTTGTGCCTGCATCATGAACTCTATCAAACAATAGAGAGTTTCTGGCAGGACACTCAGGCGCGGTATCAGCTTCTGCGGGGCGATAATGACCGGCCCCTGCTGAAACCCGCAGAGTTATTCCTTACCACGGACACATTCTTCGGCGCGCTGAAGCCCTATCCCCGCATTGAGATTCCGTCGGAAAAACAGGCGACGAAAACCGATGGAGTCGAGGTGCAGGGTTTCAGCACTCCTTTGCCCACGCTCCAGGTCGACCGTCGCGCCGTGAATCCGGCAGAGAAACTTTCTGCCTTTATTGCCGGATTCGCATCCTCCGGAGGTGGAAGAACGCTGCTTCTTGCCGAAAGTCTGGGGAGACGTGAGTTGATTGCCGATCATTTGAAGCAATACAGGCTCAATCCGGCCATATGCGACAACTATGCGCAATTTCACGCAAGCGCCAAACCCTTCATGCTCGGTGTGGGGCCATTGCACAATGGCTTCATATACCCGGCGGAAGGAATAGCCTTTGTAACCGAGAGCGAACTCTATGCCAGACACTTGCACGGCCGGAGTGAACGGGATTCACGCAAAACCAGTGCGGTTGCCGATGCTGTTCTGCGCGATCTGTCCGAGATCAAGGCAGGCGATCCGGTCGTACATGAACAACACGGCATAGGCCGTTACCTCGGGCTCATCAGCATGGATCTGGGAGAAGGTGAAACCGAGTTTCTGTCGCTGGAATACGCCGGTGGCGACAAGCTGTACGTACCTGTCTCGCAACTGCATCTTATCGGTCGATACAGCGGCGCTTCACCGGAGTCCGCACCCCTGCACAAGCTGGGCAGCGGCCAGTGGGATAAGGCAAAGCGCAAGGCGATGCAGCAGGTACGCGATTCGGCAGCGGAACTGCTCAACATCTATGCCCAGCGCGCTGCCCGCGTTGGGCACGCATTTCGCCTGAAAGAGCAGGATTACGAGGCCTTCGTCGAAGGTTTCGGATTCGAGGAAACACCGGATCAGGCGACCGCCATCGCTGCGGTAATCGACGACCTGACCTCTGCCCGGCCCATGGACAGGCTCATCTGCGGGGATGTCGGTTTTGGCAAAACGGAGGTGGCGCTAAGGGCGGCTTTTGTCGCTGTCGCGGACGGCAGGCAGGTCGCGGTACTGGTCCCTACCACGTTGCTGGCGGAACAGCATTTCCAGAATTTTTCGGATCGCTTCGGTCTGATTGCCGAGGAATGGCCGGTCAAAATTGCCGAGCTGTCGCGTTTCCGTTCAGGCAAGGAGCAGGCCCAGGCGCTGGCAGGCCTGGCGGACGGGCAGATAGATATTGTGATCGGTACGCATAAGCTGATCCAGAAAGGTGTCGGATTCAAAAACCTGGGCCTGGTCATTATCGACGAGGAGCACCGTTTTGGTGTGCGCCACAAGGAGCAGTTGAAAAACCTCCGTTCTGAAGTGGATATCCTGACGCTTACCGCCACGCCTATTCCGCGCACCCTGGCCATGTCATTGGAGGGGCTGCGCGATTTCTCCGTCATTGCAACGGCGCCGCAACGGCGACTGGCCATCAAAACCTTTGTAAACCGTTTTTCCGAGGGAATCATCCGCGAGGCCTGTCTGCGGGAGCTGAAGCGGGGCGGGCAGATATACTTTTTACATAACGAGGTGAGTACCATCCAGACGATGCATGACAAGCTTGCCCGCCTACTGCCCGAAGCACGAATAGGCATCGCGCACGGACAAATGCGGGAACGCGAACTGGAACATGTGATGAAAGATTTCTACCAGCAGCGATTCAATCTGCTGCTTTGTACAACCATCATCGAAACCGGCATCGATGTACCCACGGCCAATACCATTATCATCCATCGGGCGGATAAATTCGGGCTGGCGCAACTGCATCAACTGCGTGGGCGGGTAGGACGCTCGCATCATCAGGCTTATGCCTACCTGCTGGTACCGGAGGAGGAGGCACTGGGGGCTCAGGCCAGAAAGCGCCTGGAAGCCATTCAGTCCATGGAAGAGCTCGGGGCAGGCTTCTATCTCGCCATGCATGATCTCGAGATTCGCGGTGCCGGTGAAGTCCTCGGGGAATCCCAAAGCGGCGAGATGCAGGAAATCGGCTTCAGCCTCTACGCCAGCATGCTGGATGCAGCCGTGCGGTCACTGAAGGAAGGCAAAGAACCCGACATGCAGCACCCCCTTGGCGTTGCCACCGAGATCAACCTGCATGTTCCCGCTTTGCTGCCTGAGGATTATTGCAGCGATATACACGAGCGGCTGATCCTGTACAAACGCATGGCCAATTGCACCGGCGATGAACAACTGGATGAAATGCAGATTGAATTGACGGACCGCTTCGGCCTATTACCGGATCCGGTCAGGGCATTGCTCGATTGCCACCGTTTACGCATCGCTGCGGCGCCGCTGGGAATCGTCCGCGTTGAGGCAAGCAGCGAATCCATTCAGGTTCAGTTTATGCCCAATCCCCCCGTGGATGCCGCAAAGATTGTCGCCCTTCTTCAGCGCAGCCGCGACTATCAGCTTTCCGGACCTGATCGATTGAAAATAAAAACGCGTATCGCGGGAGTGAGGGAACGGGTTGCGCGGATAATGGACTTGTTTACCGAATTGAGCACATAA
PROTEIN sequence
Length: 1156
MALNLTIPPSGSTIRYDHFDGSSDSLALAQLALEARAKPIAIITASALAAQRLLEEIPFFAPELRTRLLPDWETLPYDTFSPHQDLVSERLATLYQLMNGACDILIVPVTTALYRMPPPEYLAAHTFFLARGETLDLNALRGQMTLAGYSHVTQVLSPGEYSVRGGLIDLFPMGSPLPYRIDLLDNEIETIRTFDVDTQRSVYPVTEIRLLPAREFPLDEEGRTRFRGRFREKFEGDPSRSLIYKDISKGGSPAGIEYYLPLFFEHTATLFDYLPQTALLCLHHELYQTIESFWQDTQARYQLLRGDNDRPLLKPAELFLTTDTFFGALKPYPRIEIPSEKQATKTDGVEVQGFSTPLPTLQVDRRAVNPAEKLSAFIAGFASSGGGRTLLLAESLGRRELIADHLKQYRLNPAICDNYAQFHASAKPFMLGVGPLHNGFIYPAEGIAFVTESELYARHLHGRSERDSRKTSAVADAVLRDLSEIKAGDPVVHEQHGIGRYLGLISMDLGEGETEFLSLEYAGGDKLYVPVSQLHLIGRYSGASPESAPLHKLGSGQWDKAKRKAMQQVRDSAAELLNIYAQRAARVGHAFRLKEQDYEAFVEGFGFEETPDQATAIAAVIDDLTSARPMDRLICGDVGFGKTEVALRAAFVAVADGRQVAVLVPTTLLAEQHFQNFSDRFGLIAEEWPVKIAELSRFRSGKEQAQALAGLADGQIDIVIGTHKLIQKGVGFKNLGLVIIDEEHRFGVRHKEQLKNLRSEVDILTLTATPIPRTLAMSLEGLRDFSVIATAPQRRLAIKTFVNRFSEGIIREACLRELKRGGQIYFLHNEVSTIQTMHDKLARLLPEARIGIAHGQMRERELEHVMKDFYQQRFNLLLCTTIIETGIDVPTANTIIIHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVPEEEALGAQARKRLEAIQSMEELGAGFYLAMHDLEIRGAGEVLGESQSGEMQEIGFSLYASMLDAAVRSLKEGKEPDMQHPLGVATEINLHVPALLPEDYCSDIHERLILYKRMANCTGDEQLDEMQIELTDRFGLLPDPVRALLDCHRLRIAAAPLGIVRVEASSESIQVQFMPNPPVDAAKIVALLQRSRDYQLSGPDRLKIKTRIAGVRERVARIMDLFTELST*