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cn_combo_scaffold_2699_17

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 11234..11656

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent siderophore receptor n=1 Tax=Pseudomonas sp. GM55 RepID=J3AP99_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 113.0
  • Bit_score: 189
  • Evalue 2.70e-45
ligand-gated channel similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 113.0
  • Bit_score: 190
  • Evalue 2.60e-46
Ligand-gated channel {ECO:0000313|EMBL:AHL34225.1}; TaxID=930166 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas brassicac similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 113.0
  • Bit_score: 190
  • Evalue 1.30e-45

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Taxonomy

Pseudomonas brassicacearum → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGAAGGCTCCTTTCAGCATCAGCAGCTATACCTCGCAGATGATGCAGAACCAGCATGCCATCACGGCGGCCGACCTCTTGACCCGGGATCCTTCGGTCCGCTCTACCGGTCAACGCGGCGGTGTCGTCGATTCCTTCTATATTCGGGGCTTTCCGATCGGTGAAGGCAACGTGGGGGAATTCGCTTTCGACGGGCAGTACGGCGTGGCCCCCAATTACCGGATATTTACCGAATACACCGAACGCATCGAGGTGCTCAAGGGGCCTGCTGCGCTGCTGTATGGGATATCCCCGAACAGCGGTGTTGGCGGCGTCATCAATATCGTTCCCAAGCGCAATTACTGGGGGGGCGTGGCTTCTTTCGGCACTTTATCGTTAGGCACGCCGCGCACTGTGCTGGTGTCGGCTACGGTCGACTTCTGA
PROTEIN sequence
Length: 141
MKAPFSISSYTSQMMQNQHAITAADLLTRDPSVRSTGQRGGVVDSFYIRGFPIGEGNVGEFAFDGQYGVAPNYRIFTEYTERIEVLKGPAALLYGISPNSGVGGVINIVPKRNYWGGVASFGTLSLGTPRTVLVSATVDF*