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cn_combo_scaffold_2803_5

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: comp(2811..5237)

Top 3 Functional Annotations

Value Algorithm Source
RNA binding S1 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8N5_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 790.0
  • Bit_score: 1484
  • Evalue 0.0
RNA binding S1 similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 790.0
  • Bit_score: 1484
  • Evalue 0.0
  • rbh
RNA binding S1 {ECO:0000313|EMBL:ABB74886.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 790.0
  • Bit_score: 1484
  • Evalue 0.0

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2427
ATGTTACTGCCATTAACCGCAGATTCCTCTGGCTCAGTTCACCTTTCCACTCTGCCCATCATGCTGCCATCCATTGAACAACGTCTTTCCCTTGAACTCGGCGCGAAGCCTGCACAGGTTACCGCGGCCATTGCCTTGCTCGATGAAGGTGCCACCGTGCCCTTTATTGCACGTTACCGCAAGGAGGTGACAGGTGGGCTGGACGATACGCAGTTGCGCCTGCTGGAAGAACGGTTGGGTTATCTACGTGAACTGGAAGACAGGCGTGCCGTGATCATCGCATCGATAGAAGAGCAGGGGAAAATGACGCCCGCGCTGCTTGCTTCCATCCTGCAGGCCGAGGATAAGACACGGCTGGAAGATCTGTATCTCCCCTTCAAGAAAAAGCGGCGCACCAAGGCGCAGATCGCGCTGGAAGCGGGGCTGGAGCCACTGGCGGATGCGCTGCTTGCCGACCCGATGCTGCAACCCGAGGAAGAGGCCGTCAAGTACTTGAAGCCGGCCTTCACCACCGAGCAGGGGGATAATCCCGGGGTACCGGATGTGAAAGCTGCGCTCGAGGGAGCACGCCAGATACTGATGGAACGTTTCGCGGAAGATGCCGAGTTGCTTCAGTGGCTGCGCGAGTATCTGCTGGACCATGGGGTGGTGGAGTCGAAAGTCGCGAGCGACAAGAATGGTGGCAAGGAAGAGGAGGGCGCGAAATATTCCGATTATTTCGATTACTCCGAACCGCTCAGCTCTATTCCTTCACACCGGGCGCTGGCGCTTTTTCGGGGGCGACGTGAAGAAGTTTTGCGCGTTGCCCTGCGTCTGGATTCGGAGGCGGAGAAACCGAAATGGGATGCACCGCATAACCCGTGCGAGGCGCGCATAGCTATCCGGTTCGGCATTGCGGACAAAGGGCGGCCTGCCGATGCGTGGCTGATGGATACGGTGCGCTGGACCTGGCGGGTGAAGAGCTTTCCACATCTGGAAATCGATCTTATGGGCACGTTGCGCACGCGGGCGGAGACCGAAGCAATCCAGGTCTTTGCGCGCAACCTGAAAGCCCTGCTCATGACCGCTCCCGCCGGGCCTCGCGTGACAATCGGCCTCGACCCCGGCTTGCGCACGGGGGTGAAGGTCGCAGTAGTGGATGCGACAGGGCGGGTCATGGAAACGGCCACCGTTTATCCACATCAGCCCAGGAATGATTGGGATGGATCGCTTCATGTTCTCGGCGCGCTTGCGGAAAAATATCGGGTGTCTCTGATAGCGATAGGCAATGGCACCGCTTCGCGCGAGACCGACAAGCTGGCAAAAGACCTGATCAAGCGTCGTCCCGATCTCAAGCTCACCTCTATCGTGGTTTCGGAAGCGGGAGCTTCGGTTTATTCCGCCTCCGATCTGGCATCCAGGGAATTCCCCGATATGGATGTGTCGCTGAGAGGAGCGGTTTCCATTGCGCGCCGCCTGCAGGACCCGCTGGCGGAACTGGTCAAAGTCGATCCGAAATCGATTGGCGTAGGTCAATACCAGCATGATGTCGGGCAAACCCAGCTCGCGCGCTCGCTCGATGCCGTGGTCGAAGACTGTGTGAACGCGGTAGGCGTGGATGTCAACACGGCCTCCGCGCCGTTGCTCGAACGCGTTTCGGGGCTTAACGCCGCTGTCGCGCAAAGCATCGTTGTCCATCGTGAGGCAAACGGAATGTTCACCTCGCGTGAAGCTCTGCACCAGGTTCCGCGTTTGGGTGAGAAAACCTTCGAGCAGGCAGCAGGCTTCCTGCGCGTGATGCATGGCGAGAACCCGCTTGATGCCTCGGCAGTGCATCCCGAGTCGTATCCCGTCGTGCAAAGAATCCTTTCCGACCTGAAGCAGGAAATCAGGTCGATCATCGGCAATAACAAATTATTGAAGTCGCTCAATCCCGCGAGGTATGCGGATGATCGATTCGGCGTGCCGACCGTGACCGACATCGTGAAGGAGCTGGAAAAGCCGGGGCGTGATCCCCGGCCGGAATTCATCACCGCCGCATTCAAGGAAGGCGTGAACGAGATTTCCGATCTGCAGCCGGGAATGCTGCTGGAAGGCGTGGTCACTAATGTGGCCGCCTTTGGCGCATTCGTCGATATCGGAGTGCATCAGGATGGACTGGTACACATCTCCGCGCTCGCTGACAAATTCGTCAAAGACCCGCACACGGTCGTCAAGGTGGGGCAGGTGGTCAAGGTCAAGGTGCTGGAAGTCGATGAAAAGCGCAAGCGCATTGCGCTGACCATGAGAATGACAGATGCGCCAGCACCACAAACACAGGAGGCGCGAGGAACCGGCAAGCGTGAGCAGCCAAGGGATAGGAAGGACCGCTCAGCCAGGCCCCAGCAGAAACAGGATTCTAGGCCTGATACGGCGATGGCTGCGGCTTTTGCGAGATTGAAGGGTTAA
PROTEIN sequence
Length: 809
MLLPLTADSSGSVHLSTLPIMLPSIEQRLSLELGAKPAQVTAAIALLDEGATVPFIARYRKEVTGGLDDTQLRLLEERLGYLRELEDRRAVIIASIEEQGKMTPALLASILQAEDKTRLEDLYLPFKKKRRTKAQIALEAGLEPLADALLADPMLQPEEEAVKYLKPAFTTEQGDNPGVPDVKAALEGARQILMERFAEDAELLQWLREYLLDHGVVESKVASDKNGGKEEEGAKYSDYFDYSEPLSSIPSHRALALFRGRREEVLRVALRLDSEAEKPKWDAPHNPCEARIAIRFGIADKGRPADAWLMDTVRWTWRVKSFPHLEIDLMGTLRTRAETEAIQVFARNLKALLMTAPAGPRVTIGLDPGLRTGVKVAVVDATGRVMETATVYPHQPRNDWDGSLHVLGALAEKYRVSLIAIGNGTASRETDKLAKDLIKRRPDLKLTSIVVSEAGASVYSASDLASREFPDMDVSLRGAVSIARRLQDPLAELVKVDPKSIGVGQYQHDVGQTQLARSLDAVVEDCVNAVGVDVNTASAPLLERVSGLNAAVAQSIVVHREANGMFTSREALHQVPRLGEKTFEQAAGFLRVMHGENPLDASAVHPESYPVVQRILSDLKQEIRSIIGNNKLLKSLNPARYADDRFGVPTVTDIVKELEKPGRDPRPEFITAAFKEGVNEISDLQPGMLLEGVVTNVAAFGAFVDIGVHQDGLVHISALADKFVKDPHTVVKVGQVVKVKVLEVDEKRKRIALTMRMTDAPAPQTQEARGTGKREQPRDRKDRSARPQQKQDSRPDTAMAAAFARLKG*