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cn_combo_scaffold_3806_6

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 5709..6242

Top 3 Functional Annotations

Value Algorithm Source
def; peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 177.0
  • Bit_score: 346
  • Evalue 6.20e-93
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 177.0
  • Bit_score: 346
  • Evalue 3.10e-92
Peptide deformylase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBB3_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 177.0
  • Bit_score: 346
  • Evalue 2.20e-92

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGCCGATTAAGTCTGTCCTCAAAATGGGGGATCCCCGCTTACTCGAAGTGGCCCGGAAGGTGGAGAATTTCAGCGCGCCTGAGTTCGAAGCATTGCTTCAAGACATGCGTGATACGATGGAGGCGTTGGAGGGCGCCGGCCTGGCTGCGCCGCAGATCGGGATCAGCCTGCAGGTTGTCATTTTCGGGGTGAAGCATAATCCACGCTATCCGGATGCGGAGGAGGTACCCTACACAGTGCTGGTAAATCCGGTACTGACCCCTCTCACGGAATATATGGAGCAGGATTGGGAAGGCTGTCTGAGTGTTCCCGGTCTGCGCGGGATGGTCCCCCGATATGCCAGGATACGTTATGAGGGTTCGGACCAATATGGTAATCGCATAGATCGGACGGTGGAGGGATTTCACGCCCGGGTGGTGCAACACGAATGCGATCACTTGCAGGGGATTCTCTACCCGATGCGGATTACCGATTTTCGCACATTCGGTTTTACCGATGTGCTGTTCCCGGACAGACCGCCCTTGGCCGAATAG
PROTEIN sequence
Length: 178
MPIKSVLKMGDPRLLEVARKVENFSAPEFEALLQDMRDTMEALEGAGLAAPQIGISLQVVIFGVKHNPRYPDAEEVPYTVLVNPVLTPLTEYMEQDWEGCLSVPGLRGMVPRYARIRYEGSDQYGNRIDRTVEGFHARVVQHECDHLQGILYPMRITDFRTFGFTDVLFPDRPPLAE*