ggKbase home page

cn_combo_scaffold_4375_5

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: comp(5821..6207)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K210_AZOSB similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 119.0
  • Bit_score: 153
  • Evalue 1.20e-34
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 118.0
  • Bit_score: 181
  • Evalue 7.20e-43
dksA1; dnaK suppressor protein similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 119.0
  • Bit_score: 153
  • Evalue 3.20e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGTCCCCTCCGCAATTGGAATTCTTTCGTGCTCGCCTGGAGGATGAGCGAAAACGACTGCTGGAGTGCGCGCAACGTACGCTGGAACAGATGCAGGAAGTAGCCGCAGAACCCGATTTCAATGACCGCGCCAGCAGGGAGGAAAAATTTCTGCTGGAATTCCGTGTGCGGGATCGGGAACGCAACTTGCTGAGAAAGATCGAGCAGGCGCTTCAACGCATCGAAGACGGAACTTATGGCTGGTGCCAGGAAACAGGCGATCCTATCGGTATTCCCCGTCTACTGGCAAGGCCGACCGCCAACCTGTGCATCGAGGCCCAGGAACGCCATGAGTTGCTTGAGCGCACCCATGGTGCCGTAGCGCTGGAAGAACCGGGAGGGGTATAG
PROTEIN sequence
Length: 129
MSPPQLEFFRARLEDERKRLLECAQRTLEQMQEVAAEPDFNDRASREEKFLLEFRVRDRERNLLRKIEQALQRIEDGTYGWCQETGDPIGIPRLLARPTANLCIEAQERHELLERTHGAVALEEPGGV*