ggKbase home page

cn_combo_scaffold_4398_11

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: comp(9566..10624)

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y750_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 324.0
  • Bit_score: 584
  • Evalue 7.30e-164
sigma-54 dependent trancsriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 324.0
  • Bit_score: 584
  • Evalue 2.00e-164
  • rbh
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABB75421.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrososp similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 324.0
  • Bit_score: 584
  • Evalue 1.00e-163

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
ATGCAGAAAAATGAGTTCCACACGGCTTTTTTGAATCTCTTGCGTAAGAATCGATTAATTTTCCGGCCTCCAGGTGCAGAGAACATGATTGGACAATCCCCTGCCTTCGCAAAGGTTACCCAGTTCATTGAGAAAATTGCAGGTTGCGACGCACCTGTTCTTATCGAAGGCGAGACAGGCACAGGAAAAGAACTGGCCGCACGGGCAATTCACGACAGTGGCACGAGGCGAGACAGGCCGTTTGTGCCGATAAATTGCCGCGCCATCCCGGATACCCTGATTGAAAACGAACTGTTCGGACACGAACGGGATTCCTGTACCGGAGTTCAGTCGAAACGCCCGAATCTGATTGCCCACGCCCAGTCCGGTACACTCTTCCTGGATGAAGTAGATGCGTTATCTCCCCAAGCGCAGGTTACTCTGCTGCGATTCTTCCAGGAGCAGGAGTACCTTCCGCTGGGAGGCCGCATAGCGCGCCCTGCAAAGGTAAGAATAATTATTGCCAGTAACAGAAATTTGGGGTATTTGGCCGAGAAAGGCGAATTCCGGCTTGATCTTCTGTTTCGCCTTAAAATCATGTATCTCACCCTGCCGCCACTCCGCGAGCGTCAAGGTGACGCGGCTCTGTTAGCAGATTACTTCCTGCGCGAATGCTCCGGGCGTTTTAACCGCGGCAGCAAAACCTTACACCCGAATACTGTCGCATGGTTCGACAAATACAGTTGGCCCGGAAATATACGGGAACTGGAAAATCTGATCTATCGCGAGTATCTTCTCGCCGACGAACCTGTCATAAATATCGCATCGCTCGCGCCCACAGTGGTCGAACGGCGATCCGGGTTTGACCGCCGCCTCCCCGAGTTGAACGGCTTGAGCTTCACCGAGGCCAAAAACCGCGCCATAGCAGCTTTTGAACAATATTACCTTGCCGAAGCCATGGTCAGAGCGCAAGGTAACGTGACAAGAGCTGCGAGCCTTGTCGGAAAAGATCGCCGCGCGTTCGGGAAGTTGCTGAAAAAGCATAGTATGAGCAAGAACAATCTCTTTCTGGAACACTGA
PROTEIN sequence
Length: 353
MQKNEFHTAFLNLLRKNRLIFRPPGAENMIGQSPAFAKVTQFIEKIAGCDAPVLIEGETGTGKELAARAIHDSGTRRDRPFVPINCRAIPDTLIENELFGHERDSCTGVQSKRPNLIAHAQSGTLFLDEVDALSPQAQVTLLRFFQEQEYLPLGGRIARPAKVRIIIASNRNLGYLAEKGEFRLDLLFRLKIMYLTLPPLRERQGDAALLADYFLRECSGRFNRGSKTLHPNTVAWFDKYSWPGNIRELENLIYREYLLADEPVINIASLAPTVVERRSGFDRRLPELNGLSFTEAKNRAIAAFEQYYLAEAMVRAQGNVTRAASLVGKDRRAFGKLLKKHSMSKNNLFLEH*