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cn_combo_scaffold_4398_14

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 12239..12790

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=323848 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 183.0
  • Bit_score: 344
  • Evalue 9.20e-92
2',5' RNA ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y753_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 183.0
  • Bit_score: 344
  • Evalue 6.60e-92
2',5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 183.0
  • Bit_score: 344
  • Evalue 1.90e-92
  • rbh

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGGCTGAAGAGACCAGGCAAAAAGCAGTACGCCTGTTTTTTGCGATATGGCCCGACAAGGAAACCCGCATGCAGCTGGGATGGCTGACTGGGCGATTGGCATCGGTTTGCGAGGGGCGGAAAACAAAAGCGGAGAACATTCACCTTACATTGGTTTTTGTAGGGGAGGTGAGTGCAAGCCAGGTAGATGCCCTGTGTCGGGCGGCGGATGAAATTGAAGGTCATGGCGTGAAAGCCTTCGACCTTGCTATCGAAAGAATCTGCGTGTGGAAACGCAAGAATATCGTTTATGCGGAAATCAACGAGATTCCCCAGCCGCTCATCGATCTGGTCGAAGCTTTGCAGAGGAGACTTTCATTGGCAGGGTTTTCATTGGAGGAGCGGCCTTATAGGCCCCATATCACGCTCATGAGGAATGCATCCTGTAAAACGCTGCCTGAGCGGGCGGAACCAATGGTTTGGCGGGCGCGGGAGTGGGTACTGGTTAAATCGGACCAGACCAGCGACGGTCCGGTTTATACGCCGATCGGTCGCTGGTTCCTGAAAGGATGA
PROTEIN sequence
Length: 184
MAEETRQKAVRLFFAIWPDKETRMQLGWLTGRLASVCEGRKTKAENIHLTLVFVGEVSASQVDALCRAADEIEGHGVKAFDLAIERICVWKRKNIVYAEINEIPQPLIDLVEALQRRLSLAGFSLEERPYRPHITLMRNASCKTLPERAEPMVWRAREWVLVKSDQTSDGPVYTPIGRWFLKG*