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cn_combo_scaffold_4950_5

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 2962..4014

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase RluD (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 318.0
  • Bit_score: 573
  • Evalue 3.60e-161
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonad similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 318.0
  • Bit_score: 573
  • Evalue 1.80e-160
Pseudouridine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7K0_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 318.0
  • Bit_score: 573
  • Evalue 1.30e-160

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGAGTCCGGCGCCAGGAAAAAGGAATAACCATTATAGCGCAAAGCCTATAGCGCCCGAATCAGGGTATCCGCCGCCGGAATCGCCCGCTGGGATTGTGGAGCTGATCATTCCTGGACATTGCGCCGGGCTCAGGCTGGATCAGGCCCTGGCGCAACTATTGTCCGAGTGGTCCCGGAGCCGGCTCCAGTCGTGGATTCTGGAAAAACGGGTGAGCGTAGATGGCGCAAGCAGCATTCCCCGGCAGAAAGTGTGGGGCGGGGAAAAGATCCTGCTCTATCCTGCGCGTGATTCTGCTGAAACAGCGCACGCGCCGGAAGCCATTGCACTGGATATTATCCACGAAGATGATGCTATCATTATCATCAATAAGCCCGTCGGGCTCGTGGTCCATCCCGGCAGCGGAAACTGGCACGGCACTCTGCTCAATGCATTGCTGCACCATTCCCTGCAATTGAGCGGCATACCGCGCTCCGGTATCGTTCACCGGCTGGACAAGGAAACCAGCGGCCTCCTGGTAGTGGCAAAAACCCTGGAAGCCCAAACCAGCCTGGTGCGGCAATTGCAAGAGCGCACGGTTAAACGGGATTATCTGGCGCTGGTCTGGGATTGCATTTCCTCCCACGGATGGGTTGACGCGCCGGTCGGCCGCCATCCGGTACAGCGGACCAGAATGGCAGTAGTCGCAAGTGGCAAGGAAGCACGCACGCGTTACGAGGTATTGGAGCAATTCGCCGATTGCACATTGCTGCGGTGCAGCCTGGAGACGGGACGCACCCACCAGATACGTGTCCATATGGAATCTCTCGGCCATCCCCTGGTGGGAGACCCGGTGTATGGCGGCAAAGCAAAAAAAAGCAGTGGTGCGACGATGCAACTGGCCATTTTTCCCCGGCAGGCATTGCACGCTCACCGGCTGGAACTGAAGCATCCGCAGCACGGCCAGAGAATGGGGTGGGAGGCGCCATTGCCGGAAGACATGAGCAATCTGCTGCTGATGCTTCGGAAAGCGCGTGATGAGGAATCCCGTGCAATTCCAGCCATGATCAAATGA
PROTEIN sequence
Length: 351
MSPAPGKRNNHYSAKPIAPESGYPPPESPAGIVELIIPGHCAGLRLDQALAQLLSEWSRSRLQSWILEKRVSVDGASSIPRQKVWGGEKILLYPARDSAETAHAPEAIALDIIHEDDAIIIINKPVGLVVHPGSGNWHGTLLNALLHHSLQLSGIPRSGIVHRLDKETSGLLVVAKTLEAQTSLVRQLQERTVKRDYLALVWDCISSHGWVDAPVGRHPVQRTRMAVVASGKEARTRYEVLEQFADCTLLRCSLETGRTHQIRVHMESLGHPLVGDPVYGGKAKKSSGATMQLAIFPRQALHAHRLELKHPQHGQRMGWEAPLPEDMSNLLLMLRKARDEESRAIPAMIK*