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cn_combo_scaffold_4975_3

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 3858..5279

Top 3 Functional Annotations

Value Algorithm Source
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338, ECO:00003 similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 473.0
  • Bit_score: 958
  • Evalue 4.60e-276
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 473.0
  • Bit_score: 929
  • Evalue 3.50e-268
Ribulose bisphosphate carboxylase large chain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEX2_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 473.0
  • Bit_score: 958
  • Evalue 3.20e-276

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Notes

Type IA. Rose Kantor (6/30/14)

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGGCAGCAAAAACATATAACGCCGGCGTGAAGGAATACCGACAAACTTACTGGATGCCGGAATACTCCCCGTCCGATACTGATATCCTGGCTTGCTTCAAGATAACCCCGCAACCCGGTGTTGATCGTGAAGAGGCCGCTGCGGCAGTTGCCGCGGAATCCTCTACGGGTACCTGGACCACAGTCTGGACCGACCTTCTGACCGACCTGGACTATTACAAGGGCCGTGCCTATCGTATCGAGGATGTCCCTGGCGATGATACCTGTTTCTATGCTTTTGTAGCCTATCCTATTGATTTATTTGAAGAAGGATCTGTGGTCAACGTGTTCACTTCGCTGGTGGGCAACGTGTTCGGCTTCAAGGCCATCCGCGCCCTACGCCTGGAAGACGTTCGCTTCCCCATCGCCTACGTGAAGACTTGCGGCGGCCCTCCTCATGGCATACAGGTTGAGCGCGATATCCTTAATAAATATGGCCGTGCTTTGCTGGGCTGTACCATCAAACCCAAACTAGGGCTTTCCGCCAAAAACTATGGCCGTGCTGTGTACGAATGCCTGCGCGGCGGCCTGGATCTCACCAAGGACGACGAGAACGTCAACAGCCAGCCATTCATGCGTTGGCGCCAACGTTTCGATTTCGTGATGGAAGCCGTCCATAAAGCCGAACGTGAAACCGGCGAACGCAAAGGCCACTATCTGAACGTAACCGCCCCGACTCCGGAAGAGATGTACAAGCGGGCGGAGCATGCAAAGGAAATCGGCGCGCCGATCATCATGCATGACTATATCACCGGGGGTTTCTGCGCCAACACAGGACTGGCTAACTGGTGCCGGGACAACGGGATCCTATTGCACATCCATCGTGCGATGCACGCAGTCATCGACCGCAATCCCCACCATGGCATTCACTTCCGCGTGCTTGCCAAGATCCTGCGCCTGTCAGGCGGAGATCATCTCCACTCCGGTACCGTTGTCGGCAAGCTTGAAGGTGACCGAGCCGCCACACTGGGATGGATTGACATCATGCGCGACAGCTTCATCAAGGAAGATCGCAGCCGCGGTATCATGTTTGATCAGGATTGGGGATCTATGCCTGGGGTATTCCCGGTTGCTTCCGGTGGCATTCATGTTTGGCACATGCCTGCGCTGGTTGCTATCTTCGGCGACGATGCCTGCTTGCAATTCGGTGGAGGCACGCTGGGCCACCCATGGGGCAATGCAGCAGGCGCTGCTGCCAACCGTGTTGCGCTGGAGGCCTGTGTCGAAGCCCGTAATGAGGGAATACTGATCGAAAAGGAAGGCAAGGCCATTCTGACCAAGGCTGCAGCATCCAGTCCCGAATTGAAGATCGCCATGGAAACGTGGAAAGAGATTAAGTTCGAGTTCGACACGGTAGACAAATTGGATGTCGTCCACAAATAA
PROTEIN sequence
Length: 474
MAAKTYNAGVKEYRQTYWMPEYSPSDTDILACFKITPQPGVDREEAAAAVAAESSTGTWTTVWTDLLTDLDYYKGRAYRIEDVPGDDTCFYAFVAYPIDLFEEGSVVNVFTSLVGNVFGFKAIRALRLEDVRFPIAYVKTCGGPPHGIQVERDILNKYGRALLGCTIKPKLGLSAKNYGRAVYECLRGGLDLTKDDENVNSQPFMRWRQRFDFVMEAVHKAERETGERKGHYLNVTAPTPEEMYKRAEHAKEIGAPIIMHDYITGGFCANTGLANWCRDNGILLHIHRAMHAVIDRNPHHGIHFRVLAKILRLSGGDHLHSGTVVGKLEGDRAATLGWIDIMRDSFIKEDRSRGIMFDQDWGSMPGVFPVASGGIHVWHMPALVAIFGDDACLQFGGGTLGHPWGNAAGAAANRVALEACVEARNEGILIEKEGKAILTKAAASSPELKIAMETWKEIKFEFDTVDKLDVVHK*