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cn_combo_scaffold_6220_2

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: comp(219..947)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F5_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 242.0
  • Bit_score: 474
  • Evalue 5.60e-131
sigma 28 (flagella/sporulation) similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 242.0
  • Bit_score: 474
  • Evalue 1.60e-131
  • rbh
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 242.0
  • Bit_score: 474
  • Evalue 7.80e-131

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGTACACTTCGGTCGGCACCATCGATAAACAACAGCATATTGTGGAGTTTACTCCGCTTGTAAAACGAATTGCCAATCACATGATGGCGAGATTGCCTGTCAGTGTTGAAGCAGATGACCTGGTACAGGTCGGAATGATCGGCCTGATGGAAGCGTTGAACCGCTATGAAGAGATGCCCGGGGCACAATTCGAGACTTATGCGCAGCAGCGCATTCGCGGCGCCATGCTCGACGAGCTGCGCCAGCTGGATTGGCTTCCGCGGGGAGCTCGAAGGGTCATGCGCCAGATCGAGAGCGCTATCAATGTGCTGCAGCAGCGCCTCGGCCGCTCTCCTTCGGAGCGGCAGATCGCCGAAGAACTCGGCGTGTCGATCGAAAGTTACCAGCAGATGCTGTTTGAAGCAAAAGGAACCCAGCTTATCCATTATGAGGATTTTTCGGACGATGAGGACGACGATTTTCTGGAGCGCAACTGTGCCGACAATACTGCTGATCCGCTGGCGGCGCTGCTCGACGGCGATTTGCGCCGGATTTTGATCAACGCAATAGAGATCCTGCCCGAGCGTGAAAAAACGCTGATGGGGCTGTACTACGAGCAGGAACTGAATTTCAAGGAAATCGGCGCCGTTTTGGGCGTATCCGAATCGAGAATATGTCAGATGCACAGTCAGGCGATTGCTCGGCTACGCGTGCGACTCAAGGAATGCGCATGGACTTCAATAGCATAA
PROTEIN sequence
Length: 243
MYTSVGTIDKQQHIVEFTPLVKRIANHMMARLPVSVEADDLVQVGMIGLMEALNRYEEMPGAQFETYAQQRIRGAMLDELRQLDWLPRGARRVMRQIESAINVLQQRLGRSPSERQIAEELGVSIESYQQMLFEAKGTQLIHYEDFSDDEDDDFLERNCADNTADPLAALLDGDLRRILINAIEILPEREKTLMGLYYEQELNFKEIGAVLGVSESRICQMHSQAIARLRVRLKECAWTSIA*