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cn_combo_scaffold_7898_3

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: comp(1697..3166)

Top 3 Functional Annotations

Value Algorithm Source
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 489.0
  • Bit_score: 956
  • Evalue 2.10e-276
Ribulose bisphosphate carboxylase large chain {ECO:0000255|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000255|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000255|HAMAP-Rule:MF_01338};; TaxID=3 similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 489.0
  • Bit_score: 956
  • Evalue 1.00e-275
Ribulose bisphosphate carboxylase large chain n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RBL_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 489.0
  • Bit_score: 956
  • Evalue 7.50e-276

Lists

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Notes

Type ID. Rose Kantor (6/30/14)

Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
ATGAGTGAAGAAATTACCGGCAAGGAACGCTACAAGTCCGGCGTAATTCCATACAAGAAAATGGGCTACTGGGATTCCGACTATGTGCCCAAAGATACGGATGTCATCGCCTTGTTCCGCATCACGCCCCAGGCAGGGGTAGATCATGAGGAAGCCGCCGCCGCTGTCGCGGGCGAATCTTCCACCGCCACCTGGACCGTTGTGTGGACCGACCGGCTGACCGCCTGCGAACTGTATCGTGCCAAGGCCTATCGTTCGGAGCTGGTGCCTAACACGGGTCCCGGCACCAAGACCGAAGCTCAGTATTTCGCTTACATAGCGTACGACCTGGACTTGTTCGAAGCGGGTTCCATCGCCAACCTGACGGCTTCCATCATCGGCAACGTGTTCGGCTTCAAGGCGGTGAAAGCGCTTCGTCTCGAAGACATGCGCATCCCGGTCGCTTATCTGAAGACTTTCCAGGGCCCTGCAACCGGCATCATCGTGGAGCGCGAGCGTCTCGATAAATTCGGCCGGCCGCTGCTCGGCGCCACCACCAAGCCGAAGCTGGGCCTCTCCGGCCGCAACTATGGCCGCGTGGTATACGAAGGACTCAAGGGTGGTCTCGACTTCATGAAAGATGACGAGAACATCAACTCGCAACCCTTCATGCACTGGCGTGACCGCTTCCTGTACTGCATGGAAGCAGTCAACAAGGCCTCCGCCGCTACCGGTGAAGTCAAGGGGCACTACCTGAACGTCACCGCGGGCACCATGGAAGACATGTACGAGCGCGCGGAATTTGCCAAGTCTCTTGGCTCCGTCATCATCATGATCGACCTGGTGATCGGCTACACCGCAATCCAGTCGATGGCGAAGTGGGCGCGCAAGAACGACATGATTCTGCACCTGCACCGCGCGGGCAACTCCACCTACTCGCGCCAGAAGAACCATGGCATGAACTTCCGCGTCATCTGCAAATGGATGCGGATGGCAGGTGTGGATCACATTCATGCAGGCACGGTTGTCGGCAAGCTGGAAGGCGACCCGCTCATGATCAAGGGCTTCTACGATACCCTGCGCGACCGTCACACACCGGTAAGCCTGGAGCATGGCCTGTTCTTCGAGCAGGACTGGGCTTCGCTGAACAAGGTCATGCCGGTTGCTTCGGGAGGTATCCATGCCGGGCAGATGCACCAATTGCTGGATTATCTTGGCGAAGACGTGATATTGCAGTTTGGCGGTGGTACCATCGGGCACCCTCAGGGCATTCAAGCCGGTGCGGTTGCCAATCGCGTTGCGCTGGAAGCAATGGTACTCGCACGCAACGAAGGCCGCGACTATGTGAAGGAAGGCCCCAAGATTCTGGAAGAAGCCGCCAGGTGGTGCACGCCGCTCAAGCAGGCGCTGGAAACCTGGAAGGACATCACCTTCAACTATGAATCCACCGACACCGCCGACTTCGTGCCGAGCGAAACAGCCAGCGTTTAA
PROTEIN sequence
Length: 490
MSEEITGKERYKSGVIPYKKMGYWDSDYVPKDTDVIALFRITPQAGVDHEEAAAAVAGESSTATWTVVWTDRLTACELYRAKAYRSELVPNTGPGTKTEAQYFAYIAYDLDLFEAGSIANLTASIIGNVFGFKAVKALRLEDMRIPVAYLKTFQGPATGIIVERERLDKFGRPLLGATTKPKLGLSGRNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYCMEAVNKASAATGEVKGHYLNVTAGTMEDMYERAEFAKSLGSVIIMIDLVIGYTAIQSMAKWARKNDMILHLHRAGNSTYSRQKNHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMIKGFYDTLRDRHTPVSLEHGLFFEQDWASLNKVMPVASGGIHAGQMHQLLDYLGEDVILQFGGGTIGHPQGIQAGAVANRVALEAMVLARNEGRDYVKEGPKILEEAARWCTPLKQALETWKDITFNYESTDTADFVPSETASV*