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cn_combo_scaffold_9081_1

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: comp(3..461)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000255|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000255|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 153.0
  • Bit_score: 306
  • Evalue 1.80e-80
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RLMD_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 153.0
  • Bit_score: 306
  • Evalue 1.30e-80
rumA; 23S rRNA 5-methyluridine methyltransferase similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 153.0
  • Bit_score: 306
  • Evalue 3.60e-81

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGACTGCTCCCGTTCTTATCGAATCCCTGGATCAGGAAGGCCGGGGCGTTGCGCATGCTGAAGGCAAGGTCATTTTCATTGAAGGCGCCCTGCCGGGAGAAGTTGTCACCTATAACGCCTATCGCAGAAAACCGAGCTTCGAACTTGCCCAGGTCGATCAGATTCTCAAGCCTGCGTTTTCGCGGGTAACGCCGGAGTGCCATCATTTCGGCATCTGCGGCGGGTGCAGCATGCAGCATATGGACGTTCGCACCCAGGTGGCGGCAAAACAGCGCGTGCTCGAAGACAATCTCAAGCACATCGGCAAGGTCGCGCCCGAACTGATATTGCCGGCGGTTTATGGATCATCCTGGGGTTACCGCTACCGGGCGCGGCTGTCGGTCCGCTACGTGGCAAAAAAAGGCGGCGTGCTGGTCGGTTTTCATGAAAAGCGCAGCAGCTTCATTGCCGACATGCAG
PROTEIN sequence
Length: 153
MTAPVLIESLDQEGRGVAHAEGKVIFIEGALPGEVVTYNAYRRKPSFELAQVDQILKPAFSRVTPECHHFGICGGCSMQHMDVRTQVAAKQRVLEDNLKHIGKVAPELILPAVYGSSWGYRYRARLSVRYVAKKGGVLVGFHEKRSSFIADMQ