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cn_combo_scaffold_9132_1

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: comp(26..1417)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCH0_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 463.0
  • Bit_score: 844
  • Evalue 6.70e-242
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 463.0
  • Bit_score: 844
  • Evalue 1.90e-242
  • rbh
Lipopolysaccharide biosynthesis {ECO:0000313|EMBL:ABB73551.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosos similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 463.0
  • Bit_score: 844
  • Evalue 9.40e-242

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
ATGACACTTCAACAATTTCTGCTCATTCTTCGTGCCCGGTACAAGGTAGTCTTCTCTATTTTATTGTTTACGGTAATCGCTACCCTTATAGTCAGTCTGTTATTGCCTAAGCAATATACCGCCGGTACAGCTGTAGTGGTTGACATCAAATCGCCCGACCCGGTAGCGGGGATGATATTGCCGGGCCTGACGTCCCCGACGTACATGGCTACCCAGGTAGACGTGATCAATAGCGACCGCGTAGCAGAGCGTGTGGTGAAAATGCTGCGCCTGGATGAGAATCCCGTGGTAAAGGAGCAGTGGGAAGAGGACGGAAGCAAGGGTGAACTTGTCACCTGGCTGGCCAGTTTGCTGAAAAGAAAGCTTGATGTCAAACCTTCCCGGGAAAGCAACGTAATCTACATTGAGTATACCGGGAATGATCCCGGTTTTTCCGCGGCTGTTGCAAACGCCTTCGCTCAAGCTTATATCGATGTGAATCTGGATTTGAAGGTTGCCCCTGCCCGCCAGTATGCACACTGGTTCAAAGGACAAACAGCCGCGGCCAGGGATGAGCTCGAGCGAGCCAAAGCCGCACTTTCTGTGTATCAACAGGAAACCGTGCTCGTCGCCACCGAGGAGCGTCTGGATTATGAAGTAGCCAAGCTCAATGAACTTTCAAGTCAACTCACTCTTATTCAAGCCCAGACATCGGACAGTAGCAGTAAACGGAAAGCCGCTGAAGATCCGGAGACTTTGGCTGAGGTCATACAGAGCCCGCTGATAAACAGCCTCAAATCGGACATTGCGCGCCTCGACGCGAAGCTTCAGGAAAGCAGCGCCTATCTGGGGCCAAATCACCCACAAACCAAGCGCACGCAATCTGAACTCGCATCTCTCAGAAGCAAGCTATCCGCTGAAACGCGCAGGATACATAGCAGTATTGGCACTTCATATGAAGTGGGGAAGCGAAAGGAGCAAGAGTTGCTCGAAGCGATGGAAAAGCAGAAGGGGCGTGTGCTGGAGCTTAACAGGCAGCGTGATCAGATGAGTGTCCTTCAAGGGGACGTGGAAGCCGCGCAACGCAATTTCGAAGGCATAAGCCAACGTAGTGCTCTCACCCGTCTGGAAAGCCTTTCCGTTCAGACTAACATAACCCCGTTGAACCCTGCTTCAGTCCCGAGTGAGCCGTCAAAACCCAAGTTATTGCTCAATATGTTGATTTCCATTTTTCTTGGGACGCTGCTAGGTGTGGGCGTTGCCTTGGTAATGGAATTAATGAATCGACGCGTGCGTTCTGTAGAGGACATCGTGGAAGCCATAGAGATTCCGGTGCTGGCCGTAATGTCCGGCCCGTCTCGCAGCAAGCTTTCGAGTCGTCTTCCCAAATTACCCAACCCGGAAACCAGTTAA
PROTEIN sequence
Length: 464
MTLQQFLLILRARYKVVFSILLFTVIATLIVSLLLPKQYTAGTAVVVDIKSPDPVAGMILPGLTSPTYMATQVDVINSDRVAERVVKMLRLDENPVVKEQWEEDGSKGELVTWLASLLKRKLDVKPSRESNVIYIEYTGNDPGFSAAVANAFAQAYIDVNLDLKVAPARQYAHWFKGQTAAARDELERAKAALSVYQQETVLVATEERLDYEVAKLNELSSQLTLIQAQTSDSSSKRKAAEDPETLAEVIQSPLINSLKSDIARLDAKLQESSAYLGPNHPQTKRTQSELASLRSKLSAETRRIHSSIGTSYEVGKRKEQELLEAMEKQKGRVLELNRQRDQMSVLQGDVEAAQRNFEGISQRSALTRLESLSVQTNITPLNPASVPSEPSKPKLLLNMLISIFLGTLLGVGVALVMELMNRRVRSVEDIVEAIEIPVLAVMSGPSRSKLSSRLPKLPNPETS*