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cn_combo_scaffold_9947_2

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: comp(636..1226)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQI4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 188.0
  • Bit_score: 306
  • Evalue 2.10e-80
TPR repeat {ECO:0000313|EMBL:CCU61690.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 188.0
  • Bit_score: 306
  • Evalue 3.00e-80
TPR-repeat protein similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 166.0
  • Bit_score: 102
  • Evalue 1.00e-19

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGCAATGGAACGATTGGCCTCCCCGCGATGCATCGCTCATGGCGGGGTACGAGTCATGGCGGGGCGGGAGGCTGAGCGAGGCGCAGTCGTTCTTCGAGGAACGAATGCGGTCGCAGCCGGAGGATGCCGATGTCTGGAGAGGCCTGGGGAATGTATCCTGGTCCCGCAGAGATTTCGTATCGGCTCTTCGCTATTTCAATGAAGCTTTGCGCCTTGAGCCATGGAATCCGATGCATTGGAGCAATATGGGCCTTGCACGCCGCGATCTTGGTCAGCCGGAAGCCGCAATTTCCGCATTTCGTGTCGCCCTGGGCCTTGATTCCCTCTATGCTCCAGCGCTCAACGAGTGGGCAAACGTTCTGTTCGATATGGGTCGCTATGAGGATGCGTTGCCGTTCTATGACGCCTCCCTCGCGATTGACGATGGCCGGGCAGTGGTTCACCACAACAAGGGCGTCTGCTTGCGGCATATGGGGAAGCTGACGGAGGCTGTATGCTACTTTCGTGCAGCACTTGAGCTGGAGCCCGGGTATCACTATTCGCAGGAAGAGCTGCAACGGCTGGTATTTGTCAATCTTCCTCCCGCATGA
PROTEIN sequence
Length: 197
MQWNDWPPRDASLMAGYESWRGGRLSEAQSFFEERMRSQPEDADVWRGLGNVSWSRRDFVSALRYFNEALRLEPWNPMHWSNMGLARRDLGQPEAAISAFRVALGLDSLYAPALNEWANVLFDMGRYEDALPFYDASLAIDDGRAVVHHNKGVCLRHMGKLTEAVCYFRAALELEPGYHYSQEELQRLVFVNLPPA*