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cn_combo_scaffold_9110_1

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 3..2144

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7C0_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 708.0
  • Bit_score: 1319
  • Evalue 0.0
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 708.0
  • Bit_score: 1319
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Ni similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 708.0
  • Bit_score: 1319
  • Evalue 0.0

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2142
GAGGGCGAGGTTCGGATGGCAATCAAGGAATCTGAAGATATGAAGAAGCTGTTGAGAGCGCAGGCGAAAGAAGCAGCAGCAAAAGAACTGACGAGGGCGGATGAAGAAATGTTCGAAAATGACAGTGAAACGGAAACAGATTCAATGGCTAAAGCTCCGGAGCAGGTGACCGAGATTGCGAAGGCGGTGATAGCGGCAAAAGAACCTGTCCTTGCCAATGGCAAGCTCGCAAGATCAAAGGCAGGCCGGGAAGGAAAAAACTCCCAGGCCAGGGATCCGGAAAAAGCTGTTGCCTCGCAGGAGCTCGAGGCGCGCCGCCTGCGTCTCAAGAACCTGATCGTGCAGGGCAAGGAGCGCGGCTATCTCACTTACGCCGAAATCAATGATCATCTCCCCGACGACATGCTCGACGCGGAGCAGATCGAGAATATCATTAGCATGATCAATGACGTCGGGATTTCCGTTTATGACGAAGCGCCCGATGCGGAAACGCTGCTCATGTCTGAAACCGCGCCTACCGTGGCCGACGAGGATGTGGTGGAAGAAGCGGAAGCCGCGCTTTCCACCGTGGATTCGGAGTTCGGACGCACAACCGACCCTGTCCGGATGTATATGCGCGAAATGGGGTCGGTGGAACTGCTGACGCGCGAGAGCGAAATCGAAATCGCAAAGCGTATCGAGGACGGCTTGAAGCACATGATCCAGGCGATTTCCGCCTGTCCGACAACCATAGCCGCAATTCTCGAACTCGCCGATAGAGTGTCGAAAGACGAGATGCGTGTCGATGAGCTGGTGGATGGGCTGCTCGATCCCAGCACGGAAGAAATTATCAGCGAAGAGATTTCCGATGAATCCCTGGAACAGGAATTGGACTCCGACACAGGAGAAGACGAGGATGTCACGGCCGTCGCAAATGCCAATCTCCTCAAGCTGAAAAATGACGCGCTGGAGCGTTTTGAAGTGGTTCAAAAGGCTTATGACGAGATGCAGAAGGTGCTCGAAAGGAAAGGGTCGGGCAACAAAGCTTATAAAGACATCCAGGAGCAGGTTTCATCCGAGCTGATGGCTATCCGCTTCTCTGCCAAAATGGTTGAACGGCTGTGCGATACGCAACGCGCGCTGGTGGATGAAATGCGCGGTTACGAGCGAAAAATAATGGAGCTTTGCATAAGCAAGGTGGGAATGACGCGTAACCATTTCATCAAGGCTTTCCCCGGTAACGAGAGCAACCTGAACTGGGTGGATGAGGAGATTGCGCTTGGCAAGCCCTACAACGCAACGCTGGAACGTTATCGTCCCGAGATCGTGGAACAGCAACAGAACCTGCTGGCACTGCAAAAGCAGGTCGGTATTCCCTTGAAGGAGCTCAAGGAAATCAACCGCCGCATGTCCACGGGCGAGGCGAAAGCGCGCCGCGCCAAACGTGAAATGACCGAAGCGAATTTGCGGCTGGTGATTTCCATCGCCAAAAAATACACCAATCGGGGATTGCAGTTCCTCGATCTCATACAGGAAGGCAACATCGGCCTGATGAAGGCGGTGGATAAATTCGAATACCGGCGCGGATACAAGTTTTCCACTTACGCAACCTGGTGGATTCGTCAGGCCATCACACGTTCCATCGCCGACCAGGCGCGCACCATCCGTATTCCGGTGCATATGATCGAAACGATCAACAAGATGAACCGCATTTCCCGCCAGATCCTGCAGGAAACCGGACAGGAGCCGGAACCCGCCATCCTCGCACAGAAAATGGAAATGCCGGAAGAGAAGATTCGTAAAATCCTCAAGATTTCCAAGGAACCGATTTCCATGGAGACCCCGATCGGGGACGACGAAGATTCTCATCTCGGGGATTTCATCGAAGATTCCGCCACCATGGCGCCTGCAGATGCGGCGGTTTACGCCAGCCTGCGCGATGTTACGAAAGATATACTGGATTCGCTGACACCGCGCGAAGCAAAAGTACTGCGCATGCGTTTCGGCATCGAAATGAATACCGACCACACGCTGGAGGAGGTCGGCAAGCAGTTCGACGTGACGCGCGAGCGCATCCGCCAGATCGAGGCCAAGGCGCTGCGCAAGCTGCGCCACCCGTCCCGTTCGGAGCGCCTGCGCAGCTTCCTGGATACTGAAGGCTGA
PROTEIN sequence
Length: 714
EGEVRMAIKESEDMKKLLRAQAKEAAAKELTRADEEMFENDSETETDSMAKAPEQVTEIAKAVIAAKEPVLANGKLARSKAGREGKNSQARDPEKAVASQELEARRLRLKNLIVQGKERGYLTYAEINDHLPDDMLDAEQIENIISMINDVGISVYDEAPDAETLLMSETAPTVADEDVVEEAEAALSTVDSEFGRTTDPVRMYMREMGSVELLTRESEIEIAKRIEDGLKHMIQAISACPTTIAAILELADRVSKDEMRVDELVDGLLDPSTEEIISEEISDESLEQELDSDTGEDEDVTAVANANLLKLKNDALERFEVVQKAYDEMQKVLERKGSGNKAYKDIQEQVSSELMAIRFSAKMVERLCDTQRALVDEMRGYERKIMELCISKVGMTRNHFIKAFPGNESNLNWVDEEIALGKPYNATLERYRPEIVEQQQNLLALQKQVGIPLKELKEINRRMSTGEAKARRAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGQEPEPAILAQKMEMPEEKIRKILKISKEPISMETPIGDDEDSHLGDFIEDSATMAPADAAVYASLRDVTKDILDSLTPREAKVLRMRFGIEMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSERLRSFLDTEG*