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cn_combo_scaffold_10025_1

Organism: CN-SCN_Nitrosomonadales_20x

partial RP 30 / 55 MC: 17 BSCG 33 / 51 MC: 23 ASCG 11 / 38 MC: 8
Location: 1..816

Top 3 Functional Annotations

Value Algorithm Source
AraC type helix-turn-helix- domain containing protein n=1 Tax=Microbulbifer agarilyticus RepID=UPI00025586C8 similarity UNIREF
DB: UNIREF100
  • Identity: 33.6
  • Coverage: 250.0
  • Bit_score: 146
  • Evalue 3.90e-32
AraC family transcriptional regulator {ECO:0000313|EMBL:ESX63668.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes similarity UNIPROT
DB: UniProtKB
  • Identity: 34.0
  • Coverage: 247.0
  • Bit_score: 141
  • Evalue 1.30e-30
AraC type helix-turn-helix-domain containing protein similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 264.0
  • Bit_score: 139
  • Evalue 1.00e-30

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
CTGAGAGTGTATGCAGTCACTGCAGCATCCCAGCATACTCATGACCCCGCTCCCGCTGAGAACAGCAATAACCTGGTACTGCTGGTGCCACTCGATGGAATGGCAGTCATCAATGGGGAAAGTAGTGATCCTGTCTGTTGCCAGCCTGGAGAAGCCTTACTGATACCGATTGATTTGATCCATCAGGTACATATTGCCGATACAGTATCCCTTGCAATTATCGATATCCCGGCCACGCTGATCGCTCCCCGGGTTTCCAATCGGGATGGATTCCTGATAAAGAAAGTCACCAGCGCCTCCATGCTAGCATTACGCTTGCTGGTTGGCTATACAAAAATGCTGATACAAATAGGAGACAGCTTGTCTCCGGACCTTACTTTACTGGTTTCCACACAGATACACGATCTGGTTACGCTGCTGTTTGGTGCGAAACGGGAAGAGGCACAAGTTACGGGCAAATGCCATTTACGTGCAGTACGACTCGAGGCGATCAAGCGTGACATCCTGGAACATATCACCGAAAGTGAATTGTCCATCAGCCAGGTCGCCCTACGCCAGGGCATATCGTCCCAATATATACGTACCTTGTTTCACAGCGAAGAAACCACCTTTGCTGATTATGTGACTGAATTACGCCTCGATCAAGCCTATTGGCATTTGCGCAGTCCTGTGTACATCGATCACTGTATCAGCACGTTAGCTTTTGATATGGGTTTCAATAATCTTTCCTGGTTCAACCGTGCTTTTAAACAGCGATTCGGCCTGACCCCATCGGAAGTGCGAAATCTATCCCGACGATCTGAAGATCAGTCATAA
PROTEIN sequence
Length: 272
LRVYAVTAASQHTHDPAPAENSNNLVLLVPLDGMAVINGESSDPVCCQPGEALLIPIDLIHQVHIADTVSLAIIDIPATLIAPRVSNRDGFLIKKVTSASMLALRLLVGYTKMLIQIGDSLSPDLTLLVSTQIHDLVTLLFGAKREEAQVTGKCHLRAVRLEAIKRDILEHITESELSISQVALRQGISSQYIRTLFHSEETTFADYVTELRLDQAYWHLRSPVYIDHCISTLAFDMGFNNLSWFNRAFKQRFGLTPSEVRNLSRRSEDQS*