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Ig5326_scaffold_1888_5

Organism: bjp_Ig5326_Hor_140_2015_Clostridiales_40_7

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 2
Location: comp(2663..3610)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 315.0
  • Bit_score: 497
  • Evalue 1.50e-137
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 315.0
  • Bit_score: 464
  • Evalue 2.80e-128
  • rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWN6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 315.0
  • Bit_score: 497
  • Evalue 1.00e-137
  • rbh

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Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 948
ATGATAGAAATTGAAAAACCAAGCATTACCTTAATTGAGAAAAAAGAAGATGGTAAATATGGCAAGATAGTATTAGAACCTCTTGAAAGAGGGTTTGCTACAACTTTAGGAAACTCTTTGCGAAGAATTCTATTATCATCGTTACCTGGAGCAGCAATAACTTCGATCAATATACAAGGCGTACTGCACGAATTTTCGACGATGCCAAAGATCAAAGAAGACCTGACAGAAATAATCCTTAACATAAAAGGCATAGCTGCTGTCATGCATACTGAAGAACCTGTACAGCTATTGATTGACGCAAGAGGTCCGAGAGAACTCAAAGCAGGAGATATCATTACAGGTGGAGAAGTAGATATCATCAACAAGGATCTTCACATAGCAACTTTAGAAGAAGGCGCTGAGTTCATTGTTGAGCTTGAAATGGAAAAAGGTAGAGGATATGTAGGTGCTGATAGAAACAAAAAAGATTCCCATTCGATAGGTGTCATTCCAATCGACTCGATATATACACCAGTTAAAAAAGTTAATTTCCTGGTAGAGAATACAAGAGTTGGTAACAGGACAGACTATGATAAGCTTACGCTTGAAGTCTGGACCAATGGAACAATAGAACCAGAAGAAGCAGTGTCGCTGGGAGCTAAAATATTAAACGAACATCTGAATCTGTTCATATCATTGACCAATCACATTGGTGACGTCGAGATAATGGTTGAGAAAGAAGAAGATGAAAAAGAAAAAGTATTGGAAATGACTATAGAAGAACTGGATTTATCTGTCAGATCATACAACTGCCTTAAAAGAGCAGGAATCAATTCTGTGGAAGAATTAACACTTAAAACAGAAGATGACATGATGAAGGTCAGAAATCTAGGGAAGAAGTCTTTAGAGGAAGTACAGAAAAAGTTAGCTGAATTGGGACAATCTTTAAAGGCATCAGATAATTAA
PROTEIN sequence
Length: 316
MIEIEKPSITLIEKKEDGKYGKIVLEPLERGFATTLGNSLRRILLSSLPGAAITSINIQGVLHEFSTMPKIKEDLTEIILNIKGIAAVMHTEEPVQLLIDARGPRELKAGDIITGGEVDIINKDLHIATLEEGAEFIVELEMEKGRGYVGADRNKKDSHSIGVIPIDSIYTPVKKVNFLVENTRVGNRTDYDKLTLEVWTNGTIEPEEAVSLGAKILNEHLNLFISLTNHIGDVEIMVEKEEDEKEKVLEMTIEELDLSVRSYNCLKRAGINSVEELTLKTEDDMMKVRNLGKKSLEEVQKKLAELGQSLKASDN*