ggKbase home page

Ig5326_scaffold_2843_3

Organism: bjp_Ig5326_Hor_140_2015_Clostridiales_40_7

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 2
Location: comp(1932..2219)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA-binding protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0C7_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 96.0
  • Bit_score: 117
  • Evalue 6.80e-24
RNA-binding protein {ECO:0000313|EMBL:KGG80186.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 96.0
  • Bit_score: 122
  • Evalue 3.00e-25
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 96.0
  • Bit_score: 117
  • Evalue 1.90e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caloranaerobacter azorensis → Caloranaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 288
ATGATTACAGGAAAGCAAAGAAGTTATTTGAAATCTTTGGCAAACAGTATTGATCCTATTGTAAATATTGGGAAAAATGGCATTACAGAAAATCTGATCAATCAGGCTGATGGTGCCTTGACAGCTAGAGAACTTGTTAAATTTAAGGTTTTAAACAATACAGAGCTTGAAGCCCAAAATACAGCCAGTGAACTGGCAGAGATCCTTGGAGCGGAATTTGTTGTGAGTATCGGCAGGAAATTTGTGCTTTACAGAGAATCGGAAGAGAAAATAATCACACTACCTTAA
PROTEIN sequence
Length: 96
MITGKQRSYLKSLANSIDPIVNIGKNGITENLINQADGALTARELVKFKVLNNTELEAQNTASELAEILGAEFVVSIGRKFVLYRESEEKIITLP*