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Ig5326_scaffold_9566_2

Organism: bjp_Ig5326_Hor_140_2015_Clostridiales_40_7

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 2
Location: 557..2110

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.6
  • Coverage: 524.0
  • Bit_score: 324
  • Evalue 2.80e-85
mfd; transcription-repair coupling factor (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 522.0
  • Bit_score: 308
  • Evalue 4.20e-81
Transcription-repair-coupling factor n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUJ7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 33.6
  • Coverage: 524.0
  • Bit_score: 324
  • Evalue 2.00e-85

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Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1554
ATGAAGAAACTTTATTTCAACAATATCGCCAAAACCAAAGAATATAAGGATATCATCCAATCAATCAATGGAAGGCAGACCGTGGTGCTTCATGAATGCACAGAGGAAGCTTTCTTATTGTTGGTGTCAGTTATTTCGAAAGAAGAGAACAAACAGACGATTATAATAACCGCTGACGATGTGAAGGCCTATAAGTTGTATCACACCTTAAGTCTGTTTACAGAAAATGCTTACCATCTGAGATCAAAGCAATCGTCTCTCTACGGAGTAGATGCCCTTAGCAGAGAAAACATGAACAGCAGGTTAGCCATCCTTGACAGATTGGTCAATGGGGAGAATATGACTGTTATTGCGTCGATTGAGGCATACTCAAATATCTTGATGGATAAAAAATCATATCAAGAGCTTTCTTTTAATGTCGATAACGACATGGAGGTCGATATTCATGATTTTTCGCGTAGACTGACTGAAATGGGTTATAGCAATGTATCTTTCATAGAGGGGAAAGGTCAGTATACAATACGGGGTGGAATTATTGATGTTTTTTCACCTTATCATGATAATCCCTGTAGAATAGAATTATTTGACAATGAAATAGATTCTCTGAGAATATTTGATCCAAAGACTCAGAGATCAATTGAAAACGTAAATAGTTACAGGGTAATACCGTGTTGTGAGATACTGCTGAGTCCAGATCAGGCGGAAAGTGTAAGAAAAAAAATGGAAAGCAGCATTGAAAGCAGAATGTCTTCTATATCTGAACTTGATGATAAAAGAGCCATAGAAGAGAACCTGAGAAGACTGGGTGAGAAAGCGGGTGAAGCGCTTAGAAATGGCGACTACATCTACAACATTGAGTTTTTCAGCCCTTATCTGCCAATAAAGACTTATAATATCGGTGATTATCTAAAGAGTGATGCTGTGGTTGTTTTACATGAACCTAATGCCATTAGGGAATCCAGAAAAGATAGTTACGATGACTTCATCATGAAATTCACGGAGTTGTATGGCAATGGTCAGGTAATAAGCGAGCAGGAGCATATTTTTAAGGATTTTCACCAATCAATCAGTAATATTAAGACTCGCCTAAGTTTAATGTTATATAATAACACATTGAAAAACAACATAGATTTTCAAGTGGTGAAGCTGGTTAGTGTCAGATCTCGTGAATCAAATCAATACTACGCCAAAATAGATGAATTAGCTAAGGATATAAACCGCCTAAAATATAATGGCTACAAGATATATCTGGAACTGGGAAGTGAAGAGACCGCTAATAAAATACAGGATTCATTGAAGAAATCCGATTGTGACGTGGCTTTAGCTTTCAATTTAAAAAAAGAACTGCTCTCTGGCCAGGCGGCAATAGTGATCGGTTATGCGGAAAGAGGCATTGATTTTCCTGATTTAAAACTCATGGTACTCACAGAAAAAGATATCCTTGGCAGTAAAATCAGACGAAAGAAATCGCCGAAGAAACATAAGGCGTCAAAAATCGACACTTTTACCGACCTTAAACCTGGAGATTATGTGGTTCATGAGCATCATGGCATA
PROTEIN sequence
Length: 518
MKKLYFNNIAKTKEYKDIIQSINGRQTVVLHECTEEAFLLLVSVISKEENKQTIIITADDVKAYKLYHTLSLFTENAYHLRSKQSSLYGVDALSRENMNSRLAILDRLVNGENMTVIASIEAYSNILMDKKSYQELSFNVDNDMEVDIHDFSRRLTEMGYSNVSFIEGKGQYTIRGGIIDVFSPYHDNPCRIELFDNEIDSLRIFDPKTQRSIENVNSYRVIPCCEILLSPDQAESVRKKMESSIESRMSSISELDDKRAIEENLRRLGEKAGEALRNGDYIYNIEFFSPYLPIKTYNIGDYLKSDAVVVLHEPNAIRESRKDSYDDFIMKFTELYGNGQVISEQEHIFKDFHQSISNIKTRLSLMLYNNTLKNNIDFQVVKLVSVRSRESNQYYAKIDELAKDINRLKYNGYKIYLELGSEETANKIQDSLKKSDCDVALAFNLKKELLSGQAAIVIGYAERGIDFPDLKLMVLTEKDILGSKIRRKKSPKKHKASKIDTFTDLKPGDYVVHEHHGI